Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBCP0CG48 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
UBCP0CG48 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.07□□□□□ -0.16
UBCP0CG48 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBCP0CG48 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBCP0CG48 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.07□□□□□ -0.16
UBCP0CG48 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.07□□□□□ -0.16
UBCP0CG48 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.07□□□□□ -0.16
UBCP0CG48 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
UBCP0CG48 AL049840.3-201ENST00000602669 611 ntBASIC14.07□□□□□ -0.16
UBCP0CG48 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.07□□□□□ -0.16
UBCP0CG48 AL161645.1-201ENST00000622716 1255 ntBASIC14.07□□□□□ -0.16
UBCP0CG48 AC116407.3-201ENST00000623905 1129 ntBASIC14.07□□□□□ -0.16
UBCP0CG48 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.07□□□□□ -0.16
UBCP0CG48 AC087481.3-201ENST00000602886 1894 ntBASIC14.07□□□□□ -0.16
UBCP0CG48 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBCP0CG48 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBCP0CG48 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
UBCP0CG48 WASH6P-202ENST00000359512 1437 ntBASIC14.07□□□□□ -0.16
UBCP0CG48 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UBCP0CG48 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBCP0CG48 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBCP0CG48 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.06□□□□□ -0.16
UBCP0CG48 AC079776.4-201ENST00000511039 504 ntBASIC14.06□□□□□ -0.16
UBCP0CG48 RNA5SP415-201ENST00000517246 115 ntBASIC14.06□□□□□ -0.16
UBCP0CG48 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UBCP0CG48 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.06□□□□□ -0.16
UBCP0CG48 RN7SL510P-201ENST00000581311 263 ntBASIC14.06□□□□□ -0.16
UBCP0CG48 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.06□□□□□ -0.16
UBCP0CG48 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 AL031008.1-201ENST00000619963 541 ntBASIC14.06□□□□□ -0.16
UBCP0CG48 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UBCP0CG48 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms