Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.02■□□□□ 0.15
MMP2P08253 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.02■□□□□ 0.15
MMP2P08253 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.02■□□□□ 0.15
MMP2P08253 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP2P08253 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP2P08253 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MMP2P08253 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP2P08253 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.01■□□□□ 0.15
MMP2P08253 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP2P08253 AC241585.1-201ENST00000433527 519 ntBASIC16.01■□□□□ 0.15
MMP2P08253 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP2P08253 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.01■□□□□ 0.15
MMP2P08253 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP2P08253 RN7SL618P-201ENST00000477850 296 ntBASIC16.01■□□□□ 0.15
MMP2P08253 IGHV3-42-201ENST00000520410 361 ntBASIC16.01■□□□□ 0.15
MMP2P08253 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP2P08253 AC009407.1-201ENST00000568958 598 ntBASIC16.01■□□□□ 0.15
MMP2P08253 AC027796.2-201ENST00000575326 344 ntBASIC16.01■□□□□ 0.15
MMP2P08253 AL390754.1-201ENST00000619088 582 ntBASIC16.01■□□□□ 0.15
MMP2P08253 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP2P08253 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP2P08253 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP2P08253 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16■□□□□ 0.15
MMP2P08253 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
MMP2P08253 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16■□□□□ 0.15
MMP2P08253 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 AC090616.6-203ENST00000579186 1945 ntBASIC16■□□□□ 0.15
MMP2P08253 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16■□□□□ 0.15
MMP2P08253 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16■□□□□ 0.15
MMP2P08253 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16■□□□□ 0.15
MMP2P08253 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16■□□□□ 0.15
MMP2P08253 AC004890.2-204ENST00000481968 304 ntBASIC16■□□□□ 0.15
MMP2P08253 ZNF890P-202ENST00000530367 1156 ntBASIC16■□□□□ 0.15
MMP2P08253 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16■□□□□ 0.15
MMP2P08253 AC044860.1-202ENST00000559481 777 ntBASIC16■□□□□ 0.15
MMP2P08253 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
MMP2P08253 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 AL109936.8-201ENST00000641772 604 ntBASIC16■□□□□ 0.15
MMP2P08253 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16■□□□□ 0.15
MMP2P08253 AL162727.3-201ENST00000635661 2787 ntBASIC16■□□□□ 0.15
MMP2P08253 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16■□□□□ 0.15
MMP2P08253 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms