Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.29■□□□□ 0.52
TPM2P07951 AC006449.6-201ENST00000612330 2296 ntBASIC18.29■□□□□ 0.52
TPM2P07951 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 GGT4P-201ENST00000623672 1708 ntBASIC18.29■□□□□ 0.52
TPM2P07951 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 PCGF3-213ENST00000620529 1899 ntBASIC18.29■□□□□ 0.52
TPM2P07951 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM2P07951 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 AC112504.1-201ENST00000623415 1841 ntBASIC18.28■□□□□ 0.52
TPM2P07951 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TPM2P07951 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM2P07951 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 LAGE3P1-201ENST00000425356 484 ntBASIC18.28■□□□□ 0.52
TPM2P07951 UPK3BP1-201ENST00000428678 509 ntBASIC18.28■□□□□ 0.52
TPM2P07951 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM2P07951 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 AC087641.1-201ENST00000557561 1021 ntBASIC18.28■□□□□ 0.52
TPM2P07951 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.28■□□□□ 0.52
TPM2P07951 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 CYP2A7P1-201ENST00000595391 815 ntBASIC18.28■□□□□ 0.52
TPM2P07951 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 AC117489.1-201ENST00000625169 3217 ntBASIC18.28■□□□□ 0.52
TPM2P07951 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM2P07951 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.28■□□□□ 0.52
TPM2P07951 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM2P07951 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM2P07951 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM2P07951 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM2P07951 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.27■□□□□ 0.52
TPM2P07951 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.27■□□□□ 0.52
TPM2P07951 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.27■□□□□ 0.52
TPM2P07951 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM2P07951 AC005412.3-201ENST00000580309 715 ntBASIC18.27■□□□□ 0.52
TPM2P07951 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM2P07951 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TPM2P07951 AC016027.1-202ENST00000607927 1699 ntBASIC18.27■□□□□ 0.52
TPM2P07951 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM2P07951 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TPM2P07951 BEND3P1-201ENST00000421591 1944 ntBASIC18.27■□□□□ 0.51
TPM2P07951 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TPM2P07951 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TPM2P07951 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TPM2P07951 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TPM2P07951 GPAA1P2-202ENST00000606848 1787 ntBASIC18.27■□□□□ 0.51
TPM2P07951 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TPM2P07951 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TPM2P07951 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TPM2P07951 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TPM2P07951 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM2P07951 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM2P07951 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM2P07951 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM2P07951 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM2P07951 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM2P07951 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM2P07951 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.26■□□□□ 0.51
TPM2P07951 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM2P07951 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM2P07951 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM2P07951 HCG4-201ENST00000418983 998 ntBASIC18.26■□□□□ 0.51
TPM2P07951 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM2P07951 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms