Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
APPP05067 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.19■□□□□ 0.66
APPP05067 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.19■□□□□ 0.66
APPP05067 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
APPP05067 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APPP05067 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 AP001282.1-201ENST00000531301 1499 ntBASIC19.18■□□□□ 0.66
APPP05067 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
APPP05067 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
APPP05067 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
APPP05067 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.18■□□□□ 0.66
APPP05067 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.18■□□□□ 0.66
APPP05067 SPDYE17-201ENST00000412399 783 ntBASIC19.18■□□□□ 0.66
APPP05067 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.18■□□□□ 0.66
APPP05067 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.18■□□□□ 0.66
APPP05067 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.18■□□□□ 0.66
APPP05067 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.18■□□□□ 0.66
APPP05067 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.18■□□□□ 0.66
APPP05067 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.18■□□□□ 0.66
APPP05067 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
APPP05067 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.18■□□□□ 0.66
APPP05067 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APPP05067 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.17■□□□□ 0.66
APPP05067 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
APPP05067 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
APPP05067 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.17■□□□□ 0.66
APPP05067 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.17■□□□□ 0.66
APPP05067 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.17■□□□□ 0.66
APPP05067 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.17■□□□□ 0.66
APPP05067 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.17■□□□□ 0.66
APPP05067 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 SPCS2P1-201ENST00000561636 679 ntBASIC19.17■□□□□ 0.66
APPP05067 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.17■□□□□ 0.66
APPP05067 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 AL096865.1-201ENST00000606796 927 ntBASIC19.17■□□□□ 0.66
APPP05067 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.17■□□□□ 0.66
APPP05067 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
APPP05067 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 AC068587.6-202ENST00000641839 5619 ntBASIC19.17■□□□□ 0.66
APPP05067 AC087499.5-201ENST00000452760 1342 ntBASIC19.17■□□□□ 0.66
APPP05067 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
APPP05067 DOC2GP-204ENST00000639052 2548 ntBASIC19.17■□□□□ 0.66
APPP05067 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.17■□□□□ 0.66
APPP05067 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 KRT8P37-201ENST00000451609 1420 ntBASIC19.17■□□□□ 0.66
APPP05067 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APPP05067 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
APPP05067 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
APPP05067 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
APPP05067 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APPP05067 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.16■□□□□ 0.66
APPP05067 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.16■□□□□ 0.66
APPP05067 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms