Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 DUX4L17-201ENST00000557360 1267 ntBASIC12.84□□□□□ -0.35
APOC3P02656 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC3P02656 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC3P02656 HLA-B-256ENST00000639848 1089 ntBASIC12.84□□□□□ -0.35
APOC3P02656 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
APOC3P02656 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
APOC3P02656 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
APOC3P02656 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC3P02656 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC3P02656 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC3P02656 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC3P02656 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC3P02656 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC3P02656 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
APOC3P02656 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
APOC3P02656 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.83□□□□□ -0.36
APOC3P02656 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
APOC3P02656 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 SUDS3P1-201ENST00000505831 966 ntBASIC12.83□□□□□ -0.36
APOC3P02656 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.83□□□□□ -0.36
APOC3P02656 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC3P02656 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC3P02656 SOX15-203ENST00000570788 1093 ntBASIC12.83□□□□□ -0.36
APOC3P02656 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
APOC3P02656 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC3P02656 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.83□□□□□ -0.36
APOC3P02656 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC3P02656 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APOC3P02656 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC3P02656 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC3P02656 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
APOC3P02656 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.82□□□□□ -0.36
APOC3P02656 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC3P02656 AC130371.2-201ENST00000619443 611 ntBASIC12.82□□□□□ -0.36
APOC3P02656 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.82□□□□□ -0.36
APOC3P02656 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC3P02656 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC3P02656 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC3P02656 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC3P02656 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms