Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC097359.3-201ENST00000603982 1210 ntBASIC17.97■□□□□ 0.47
ALDH1A1P00352 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.97■□□□□ 0.47
ALDH1A1P00352 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.97■□□□□ 0.47
ALDH1A1P00352 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALDH1A1P00352 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALDH1A1P00352 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.97■□□□□ 0.47
ALDH1A1P00352 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALDH1A1P00352 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ALDH1A1P00352 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 RN7SL774P-201ENST00000577467 290 ntBASIC17.96■□□□□ 0.47
ALDH1A1P00352 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.96■□□□□ 0.47
ALDH1A1P00352 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALDH1A1P00352 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ALDH1A1P00352 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ALDH1A1P00352 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 PRKXP1-201ENST00000561423 1122 ntBASIC17.95■□□□□ 0.46
ALDH1A1P00352 MIR4750-201ENST00000584564 56 ntBASIC17.95■□□□□ 0.46
ALDH1A1P00352 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.95■□□□□ 0.46
ALDH1A1P00352 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALDH1A1P00352 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALDH1A1P00352 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALDH1A1P00352 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 AC009053.2-201ENST00000563701 2365 ntBASIC17.94■□□□□ 0.46
ALDH1A1P00352 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALDH1A1P00352 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALDH1A1P00352 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALDH1A1P00352 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ALDH1A1P00352 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms