Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 AL359881.2-201ENST00000602973 570 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 AL513523.2-202ENST00000427283 2040 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 KRT18P64-201ENST00000434946 1219 ntBASIC17.85■□□□□ 0.45
GGPS1O95749 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 IGHV3-71-201ENST00000523324 359 ntBASIC17.85■□□□□ 0.45
GGPS1O95749 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.85■□□□□ 0.45
GGPS1O95749 AC036164.1-201ENST00000570544 333 ntBASIC17.85■□□□□ 0.45
GGPS1O95749 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
GGPS1O95749 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.85■□□□□ 0.45
GGPS1O95749 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
GGPS1O95749 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GGPS1O95749 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.85■□□□□ 0.45
GGPS1O95749 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GGPS1O95749 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GGPS1O95749 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.84■□□□□ 0.45
GGPS1O95749 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.84■□□□□ 0.45
GGPS1O95749 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.84■□□□□ 0.45
GGPS1O95749 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 HNRNPUP1-201ENST00000554987 333 ntBASIC17.84■□□□□ 0.45
GGPS1O95749 AL450472.2-201ENST00000603663 1156 ntBASIC17.84■□□□□ 0.45
GGPS1O95749 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 AL033527.5-201ENST00000641382 801 ntBASIC17.84■□□□□ 0.45
GGPS1O95749 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GGPS1O95749 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
GGPS1O95749 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms