Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.11■□□□□ 0.01
SNX4O95219 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 AC069335.1-201ENST00000489972 472 ntBASIC15.1■□□□□ 0.01
SNX4O95219 AC105233.2-201ENST00000523697 349 ntBASIC15.1■□□□□ 0.01
SNX4O95219 AF228730.5-201ENST00000530288 346 ntBASIC15.1■□□□□ 0.01
SNX4O95219 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX4O95219 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.1■□□□□ 0.01
SNX4O95219 AC027612.4-201ENST00000605371 583 ntBASIC15.1■□□□□ 0.01
SNX4O95219 AC009093.7-201ENST00000623853 1223 ntBASIC15.1■□□□□ 0.01
SNX4O95219 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 UXT-AS1-201ENST00000590504 1525 ntBASIC15.1■□□□□ 0.01
SNX4O95219 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SNX4O95219 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SNX4O95219 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX4O95219 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.1■□□□□ 0.01
SNX4O95219 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 MIR346-201ENST00000362234 95 ntBASIC15.09■□□□□ 0.01
SNX4O95219 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 TSEN15P1-201ENST00000423257 515 ntBASIC15.09■□□□□ 0.01
SNX4O95219 KRT18P32-201ENST00000424695 1287 ntBASIC15.09■□□□□ 0.01
SNX4O95219 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.09■□□□□ 0.01
SNX4O95219 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.09■□□□□ 0.01
SNX4O95219 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
SNX4O95219 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNX4O95219 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.09■□□□□ 0.01
SNX4O95219 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms