Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLSTN1O94985 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLSTN1O94985 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.78■□□□□ 0.44
CLSTN1O94985 MKNK2P1-201ENST00000437526 628 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 ACTG1P14-201ENST00000446382 1122 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.78■□□□□ 0.44
CLSTN1O94985 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 FAM86C2P-203ENST00000528684 1004 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.78■□□□□ 0.44
CLSTN1O94985 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.78■□□□□ 0.44
CLSTN1O94985 SNHG9-202ENST00000564014 471 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 AC026120.1-201ENST00000611536 926 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 AL691403.2-201ENST00000618460 490 ntBASIC17.78■□□□□ 0.44
CLSTN1O94985 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.78■□□□□ 0.44
CLSTN1O94985 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.78■□□□□ 0.44
CLSTN1O94985 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.78■□□□□ 0.44
CLSTN1O94985 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.78■□□□□ 0.44
CLSTN1O94985 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLSTN1O94985 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CLSTN1O94985 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLSTN1O94985 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 PRYP6-201ENST00000514804 343 ntBASIC17.77■□□□□ 0.44
CLSTN1O94985 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.77■□□□□ 0.44
CLSTN1O94985 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLSTN1O94985 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.77■□□□□ 0.44
CLSTN1O94985 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLSTN1O94985 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.77■□□□□ 0.44
CLSTN1O94985 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLSTN1O94985 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.77■□□□□ 0.43
CLSTN1O94985 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.77■□□□□ 0.43
CLSTN1O94985 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.77■□□□□ 0.43
CLSTN1O94985 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.77■□□□□ 0.43
CLSTN1O94985 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLSTN1O94985 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.76■□□□□ 0.43
CLSTN1O94985 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.76■□□□□ 0.43
CLSTN1O94985 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLSTN1O94985 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms