Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF253O75346 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF253O75346 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.53□□□□□ -0.4
ZNF253O75346 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.53□□□□□ -0.4
ZNF253O75346 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 REXO1L6P-202ENST00000619970 1078 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 AC107918.4-202ENST00000641623 219 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 AC069224.1-201ENST00000566372 1715 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 AC112504.1-201ENST00000623415 1841 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ZNF253O75346 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF253O75346 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.52□□□□□ -0.4
ZNF253O75346 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF253O75346 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 RPS15P9-201ENST00000494093 319 ntBASIC12.52□□□□□ -0.41
ZNF253O75346 KRT18P31-201ENST00000506277 1292 ntBASIC12.52□□□□□ -0.41
ZNF253O75346 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 MIR3909-201ENST00000579518 119 ntBASIC12.52□□□□□ -0.41
ZNF253O75346 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF253O75346 AC025062.2-201ENST00000605477 670 ntBASIC12.52□□□□□ -0.41
ZNF253O75346 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF253O75346 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms