Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.56■□□□□ 0.56
CTNND1O60716 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTNND1O60716 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.55■□□□□ 0.56
CTNND1O60716 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CTNND1O60716 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.55■□□□□ 0.56
CTNND1O60716 BAATP1-201ENST00000412284 1225 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.55■□□□□ 0.56
CTNND1O60716 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 CSF2RBP1-201ENST00000447905 391 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 VDAC1P7-201ENST00000462417 847 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.55■□□□□ 0.56
CTNND1O60716 RNA5SP412-201ENST00000516234 123 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.55■□□□□ 0.56
CTNND1O60716 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 CLUHP6-201ENST00000580789 941 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 MIR4538-201ENST00000581377 78 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 AC097359.3-201ENST00000603982 1210 ntBASIC18.55■□□□□ 0.56
CTNND1O60716 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTNND1O60716 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTNND1O60716 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.55■□□□□ 0.56
CTNND1O60716 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.54■□□□□ 0.56
CTNND1O60716 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CTNND1O60716 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 AC092933.1-201ENST00000393644 945 ntBASIC18.54■□□□□ 0.56
CTNND1O60716 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.54■□□□□ 0.56
CTNND1O60716 AL355864.2-201ENST00000447420 863 ntBASIC18.54■□□□□ 0.56
CTNND1O60716 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.54■□□□□ 0.56
CTNND1O60716 AP000812.2-201ENST00000538934 718 ntBASIC18.54■□□□□ 0.56
CTNND1O60716 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.54■□□□□ 0.56
CTNND1O60716 AC000095.1-201ENST00000603208 874 ntBASIC18.54■□□□□ 0.56
CTNND1O60716 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 ALOX12P2-203ENST00000570921 1945 ntBASIC18.54■□□□□ 0.56
CTNND1O60716 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CTNND1O60716 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.54■□□□□ 0.56
CTNND1O60716 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.54■□□□□ 0.56
CTNND1O60716 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTNND1O60716 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 AL139384.1-201ENST00000612143 3047 ntBASIC18.53■□□□□ 0.56
CTNND1O60716 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 MIR1908-201ENST00000410394 80 ntBASIC18.53■□□□□ 0.56
CTNND1O60716 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms