Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LCMT2O60294 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
LCMT2O60294 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LCMT2O60294 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.27■□□□□ 0.04
LCMT2O60294 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.27■□□□□ 0.04
LCMT2O60294 AC005498.2-205ENST00000593218 784 ntBASIC15.27■□□□□ 0.04
LCMT2O60294 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.27■□□□□ 0.04
LCMT2O60294 AL450472.2-201ENST00000603663 1156 ntBASIC15.27■□□□□ 0.04
LCMT2O60294 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LCMT2O60294 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.27■□□□□ 0.03
LCMT2O60294 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCMT2O60294 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LCMT2O60294 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 AC100757.3-201ENST00000622361 1406 ntBASIC15.26■□□□□ 0.03
LCMT2O60294 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.26■□□□□ 0.03
LCMT2O60294 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.26■□□□□ 0.03
LCMT2O60294 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.26■□□□□ 0.03
LCMT2O60294 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.26■□□□□ 0.03
LCMT2O60294 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.26■□□□□ 0.03
LCMT2O60294 IGHV3-42-201ENST00000520410 361 ntBASIC15.26■□□□□ 0.03
LCMT2O60294 AL512361.1-201ENST00000554200 418 ntBASIC15.26■□□□□ 0.03
LCMT2O60294 MIR4313-201ENST00000580760 101 ntBASIC15.26■□□□□ 0.03
LCMT2O60294 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.26■□□□□ 0.03
LCMT2O60294 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.26■□□□□ 0.03
LCMT2O60294 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 AL033527.5-202ENST00000641632 1098 ntBASIC15.26■□□□□ 0.03
LCMT2O60294 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LCMT2O60294 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
LCMT2O60294 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCMT2O60294 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
LCMT2O60294 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.25■□□□□ 0.03
LCMT2O60294 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms