Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN6O15212 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.08■□□□□ 0.16
PFDN6O15212 AP000842.3-202ENST00000569238 1080 ntBASIC16.08■□□□□ 0.16
PFDN6O15212 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.08■□□□□ 0.16
PFDN6O15212 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN6O15212 AC055717.3-201ENST00000622967 595 ntBASIC16.08■□□□□ 0.16
PFDN6O15212 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN6O15212 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PFDN6O15212 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.08■□□□□ 0.16
PFDN6O15212 UXT-AS1-201ENST00000590504 1525 ntBASIC16.08■□□□□ 0.16
PFDN6O15212 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.08■□□□□ 0.16
PFDN6O15212 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN6O15212 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN6O15212 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 ELL2P1-201ENST00000413990 1906 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 MIR346-201ENST00000362234 95 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PFDN6O15212 GPX1P2-201ENST00000429271 606 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.07■□□□□ 0.16
PFDN6O15212 SPCS2P4-201ENST00000436160 681 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 AL592309.1-201ENST00000443127 649 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN6O15212 AC007950.2-201ENST00000615045 2347 ntBASIC16.07■□□□□ 0.16
PFDN6O15212 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.07■□□□□ 0.16
PFDN6O15212 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN6O15212 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PFDN6O15212 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PFDN6O15212 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PFDN6O15212 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.06■□□□□ 0.16
PFDN6O15212 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN6O15212 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN6O15212 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PFDN6O15212 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 AC142381.1-201ENST00000426099 345 ntBASIC16.06■□□□□ 0.16
PFDN6O15212 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.06■□□□□ 0.16
PFDN6O15212 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
PFDN6O15212 AC061975.2-201ENST00000581722 295 ntBASIC16.06■□□□□ 0.16
PFDN6O15212 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN6O15212 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
PFDN6O15212 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms