Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC21.63■■□□□ 1.05
CHD2O14647 AL596276.2-201ENST00000447525 331 ntBASIC21.63■■□□□ 1.05
CHD2O14647 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.63■■□□□ 1.05
CHD2O14647 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 RN7SL736P-201ENST00000613111 269 ntBASIC21.63■■□□□ 1.05
CHD2O14647 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD2O14647 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.63■■□□□ 1.05
CHD2O14647 PCBP2-OT1-201ENST00000634357 590 ntBASIC21.63■■□□□ 1.05
CHD2O14647 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD2O14647 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.63■■□□□ 1.05
CHD2O14647 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD2O14647 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.63■■□□□ 1.05
CHD2O14647 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.63■■□□□ 1.05
CHD2O14647 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CHD2O14647 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 AL158070.2-201ENST00000623713 1621 ntBASIC21.62■■□□□ 1.05
CHD2O14647 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CHD2O14647 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.62■■□□□ 1.05
CHD2O14647 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 AC120498.9-201ENST00000339021 3867 ntBASIC21.62■■□□□ 1.05
CHD2O14647 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CHD2O14647 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CHD2O14647 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD2O14647 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.62■■□□□ 1.05
CHD2O14647 AC114501.1-201ENST00000445949 172 ntBASIC21.62■■□□□ 1.05
CHD2O14647 RNMTL1P1-201ENST00000454103 560 ntBASIC21.62■■□□□ 1.05
CHD2O14647 AC012618.1-201ENST00000461223 412 ntBASIC21.62■■□□□ 1.05
CHD2O14647 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 AC005740.2-201ENST00000511085 419 ntBASIC21.62■■□□□ 1.05
CHD2O14647 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.62■■□□□ 1.05
CHD2O14647 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.62■■□□□ 1.05
CHD2O14647 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD2O14647 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CHD2O14647 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.61■■□□□ 1.05
CHD2O14647 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHD2O14647 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.61■■□□□ 1.05
CHD2O14647 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CHD2O14647 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.61■■□□□ 1.05
CHD2O14647 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC21.61■■□□□ 1.05
CHD2O14647 AL353637.1-201ENST00000451571 732 ntBASIC21.61■■□□□ 1.05
CHD2O14647 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC21.61■■□□□ 1.05
CHD2O14647 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD2O14647 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD2O14647 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD2O14647 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHD2O14647 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD2O14647 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 AL645937.2-201ENST00000396808 931 ntBASIC21.6■■□□□ 1.05
CHD2O14647 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.6■■□□□ 1.05
CHD2O14647 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 MIR4313-201ENST00000580760 101 ntBASIC21.6■■□□□ 1.05
CHD2O14647 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.6■■□□□ 1.05
CHD2O14647 AC011491.1-203ENST00000637688 543 ntBASIC21.6■■□□□ 1.05
CHD2O14647 AL645728.2-202ENST00000641679 227 ntBASIC21.6■■□□□ 1.05
CHD2O14647 KRT8P4-201ENST00000509735 1454 ntBASIC21.6■■□□□ 1.05
CHD2O14647 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CHD2O14647 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD2O14647 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms