Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.1■□□□□ 0.01
CLIC1O00299 KRT18P2-201ENST00000447938 1258 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 AC098859.1-201ENST00000502915 1238 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 AC243562.2-201ENST00000561247 970 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.1■□□□□ 0.01
CLIC1O00299 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 AC068137.2-201ENST00000605408 478 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 AC099063.4-201ENST00000641099 1602 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CLIC1O00299 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLIC1O00299 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLIC1O00299 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 AC002056.1-201ENST00000395613 760 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 AC074386.1-202ENST00000463561 864 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.09■□□□□ 0.01
CLIC1O00299 AC034105.1-201ENST00000563488 319 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 AC145285.3-201ENST00000564603 959 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.09■□□□□ 0.01
CLIC1O00299 AC024267.1-201ENST00000582320 895 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 AC073389.1-201ENST00000595595 795 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 AC018892.3-201ENST00000623986 2499 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 HLA-A-201ENST00000376802 1334 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.09■□□□□ 0.01
CLIC1O00299 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLIC1O00299 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLIC1O00299 AL691432.1-201ENST00000596308 1422 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 AC104109.2-201ENST00000602919 1418 ntBASIC15.09■□□□□ 0.01
CLIC1O00299 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.08■□□□□ 0.01
CLIC1O00299 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.08■□□□□ 0.01
CLIC1O00299 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLIC1O00299 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLIC1O00299 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.08■□□□□ 0.01
CLIC1O00299 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.08■□□□□ 0.01
CLIC1O00299 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLIC1O00299 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.08■□□□□ 0
CLIC1O00299 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLIC1O00299 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.08■□□□□ 0
CLIC1O00299 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLIC1O00299 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms