Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 AL117332.1-201ENST00000622628 974 ntBASIC30.25■■■□□ 2.43
USP16Q9Y5T5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 AC097639.1-201ENST00000565519 1891 ntBASIC30.25■■■□□ 2.43
USP16Q9Y5T5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP16Q9Y5T5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.24■■■□□ 2.43
USP16Q9Y5T5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP16Q9Y5T5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP16Q9Y5T5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP16Q9Y5T5 MIR6724-1-201ENST00000616420 92 ntBASIC30.22■■■□□ 2.43
USP16Q9Y5T5 MIR6724-2-201ENST00000616483 92 ntBASIC30.22■■■□□ 2.43
USP16Q9Y5T5 MIR6724-4-201ENST00000617390 92 ntBASIC30.22■■■□□ 2.43
USP16Q9Y5T5 MIR6724-3-201ENST00000622482 92 ntBASIC30.22■■■□□ 2.43
USP16Q9Y5T5 AL121749.1-202ENST00000609313 2153 ntBASIC30.22■■■□□ 2.43
USP16Q9Y5T5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.22■■■□□ 2.43
USP16Q9Y5T5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP16Q9Y5T5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
USP16Q9Y5T5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.21■■■□□ 2.43
USP16Q9Y5T5 MIR3621-201ENST00000580529 85 ntBASIC30.21■■■□□ 2.43
USP16Q9Y5T5 MTDHP2-201ENST00000601468 714 ntBASIC30.21■■■□□ 2.43
USP16Q9Y5T5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
USP16Q9Y5T5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.2■■■□□ 2.43
USP16Q9Y5T5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.2■■■□□ 2.43
USP16Q9Y5T5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.2■■■□□ 2.43
USP16Q9Y5T5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
USP16Q9Y5T5 AC010501.1-201ENST00000606270 1962 ntBASIC30.19■■■□□ 2.42
USP16Q9Y5T5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP16Q9Y5T5 AC090877.2-201ENST00000558441 1738 ntBASIC30.19■■■□□ 2.42
USP16Q9Y5T5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
USP16Q9Y5T5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP16Q9Y5T5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
USP16Q9Y5T5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP16Q9Y5T5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.16■■■□□ 2.42
USP16Q9Y5T5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
USP16Q9Y5T5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.14■■■□□ 2.42
USP16Q9Y5T5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.14■■■□□ 2.42
USP16Q9Y5T5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.14■■■□□ 2.42
USP16Q9Y5T5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
USP16Q9Y5T5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
USP16Q9Y5T5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
USP16Q9Y5T5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.13■■■□□ 2.41
USP16Q9Y5T5 MIR4466-201ENST00000606121 54 ntBASIC30.13■■■□□ 2.41
USP16Q9Y5T5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP16Q9Y5T5 AL136116.3-201ENST00000402907 1138 ntBASIC30.12■■■□□ 2.41
USP16Q9Y5T5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.12■■■□□ 2.41
USP16Q9Y5T5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP16Q9Y5T5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP16Q9Y5T5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
USP16Q9Y5T5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP16Q9Y5T5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
USP16Q9Y5T5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
USP16Q9Y5T5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP16Q9Y5T5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP16Q9Y5T5 MIR638-201ENST00000385237 100 ntBASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms