Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA9Q9Y5H5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHA9Q9Y5H5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA9Q9Y5H5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 AL592293.1-201ENST00000502889 1188 ntBASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 AC012676.1-201ENST00000574705 1949 ntBASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA9Q9Y5H5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHA9Q9Y5H5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHA9Q9Y5H5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 AC141586.4-201ENST00000624558 1573 ntBASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 KRT18P10-201ENST00000388836 1287 ntBASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 U85056.1-201ENST00000616429 682 ntBASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA9Q9Y5H5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA9Q9Y5H5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA9Q9Y5H5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.49■■□□□ 1.19
PCDHA9Q9Y5H5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHA9Q9Y5H5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA9Q9Y5H5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA9Q9Y5H5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 ABHD17AP5-201ENST00000580133 923 ntBASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 AC068473.5-201ENST00000616428 2072 ntBASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHA9Q9Y5H5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 SPCS2P3-201ENST00000500401 656 ntBASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA9Q9Y5H5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms