Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.34■■□□□ 1.65
UBQLN1Q9UMX0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.34■■□□□ 1.65
UBQLN1Q9UMX0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBQLN1Q9UMX0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.34■■□□□ 1.65
UBQLN1Q9UMX0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.33■■□□□ 1.65
UBQLN1Q9UMX0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.32■■□□□ 1.64
UBQLN1Q9UMX0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBQLN1Q9UMX0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.32■■□□□ 1.64
UBQLN1Q9UMX0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
UBQLN1Q9UMX0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBQLN1Q9UMX0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 AC021242.3-201ENST00000607598 1377 ntBASIC25.31■■□□□ 1.64
UBQLN1Q9UMX0 SLC6A10P-202ENST00000431994 2058 ntBASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 MIR4787-201ENST00000607364 84 ntBASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
UBQLN1Q9UMX0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
UBQLN1Q9UMX0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UBQLN1Q9UMX0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.29■■□□□ 1.64
UBQLN1Q9UMX0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UBQLN1Q9UMX0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
UBQLN1Q9UMX0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
UBQLN1Q9UMX0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
UBQLN1Q9UMX0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN1Q9UMX0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
UBQLN1Q9UMX0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
UBQLN1Q9UMX0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.24■■□□□ 1.63
UBQLN1Q9UMX0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
UBQLN1Q9UMX0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
UBQLN1Q9UMX0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.23■■□□□ 1.63
UBQLN1Q9UMX0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.23■■□□□ 1.63
UBQLN1Q9UMX0 AF131216.4-201ENST00000638924 1588 ntBASIC25.22■■□□□ 1.63
UBQLN1Q9UMX0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
UBQLN1Q9UMX0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.22■■□□□ 1.63
UBQLN1Q9UMX0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
UBQLN1Q9UMX0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.22■■□□□ 1.63
UBQLN1Q9UMX0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
UBQLN1Q9UMX0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
UBQLN1Q9UMX0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN1Q9UMX0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN1Q9UMX0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN1Q9UMX0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN1Q9UMX0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN1Q9UMX0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 AC092028.1-203ENST00000608262 953 ntBASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 MIR6089-201ENST00000616698 64 ntBASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
UBQLN1Q9UMX0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
UBQLN1Q9UMX0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms