Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CDC42SE1Q9NRR8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE1Q9NRR8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.22□□□□□ -0.45
CDC42SE1Q9NRR8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE1Q9NRR8 FOXO3B-201ENST00000395675 1928 ntBASIC12.21□□□□□ -0.46
CDC42SE1Q9NRR8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.21□□□□□ -0.46
CDC42SE1Q9NRR8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 AL137060.1-201ENST00000618151 2648 ntBASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE1Q9NRR8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 WHAMMP3-201ENST00000611636 1609 ntBASIC12.19□□□□□ -0.46
CDC42SE1Q9NRR8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 AC007952.6-201ENST00000573168 2673 ntBASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 AC003957.1-201ENST00000625108 2673 ntBASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 AC138932.3-201ENST00000567634 1902 ntBASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 AC233723.2-201ENST00000623798 2106 ntBASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE1Q9NRR8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC42SE1Q9NRR8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms