Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.75■■□□□ 1.71
VPS16Q9H269 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS16Q9H269 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS16Q9H269 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.75■■□□□ 1.71
VPS16Q9H269 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS16Q9H269 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 AC141586.4-201ENST00000624558 1573 ntBASIC25.74■■□□□ 1.71
VPS16Q9H269 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.74■■□□□ 1.71
VPS16Q9H269 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.74■■□□□ 1.71
VPS16Q9H269 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS16Q9H269 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS16Q9H269 AC004812.2-201ENST00000611079 2094 ntBASIC25.73■■□□□ 1.71
VPS16Q9H269 RAP2CP1-202ENST00000605179 643 ntBASIC25.73■■□□□ 1.71
VPS16Q9H269 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.73■■□□□ 1.71
VPS16Q9H269 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS16Q9H269 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS16Q9H269 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
VPS16Q9H269 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS16Q9H269 GPX1-201ENST00000419349 1106 ntBASIC25.72■■□□□ 1.71
VPS16Q9H269 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS16Q9H269 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS16Q9H269 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
VPS16Q9H269 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS16Q9H269 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
VPS16Q9H269 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS16Q9H269 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.7■■□□□ 1.7
VPS16Q9H269 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.7■■□□□ 1.7
VPS16Q9H269 AC026202.3-201ENST00000600805 1127 ntBASIC25.7■■□□□ 1.7
VPS16Q9H269 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS16Q9H269 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.69■■□□□ 1.7
VPS16Q9H269 MIR4449-201ENST00000578365 66 ntBASIC25.69■■□□□ 1.7
VPS16Q9H269 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.69■■□□□ 1.7
VPS16Q9H269 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS16Q9H269 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS16Q9H269 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VPS16Q9H269 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS16Q9H269 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS16Q9H269 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS16Q9H269 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS16Q9H269 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS16Q9H269 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
VPS16Q9H269 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS16Q9H269 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS16Q9H269 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.66■■□□□ 1.7
VPS16Q9H269 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS16Q9H269 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS16Q9H269 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 HLA-L-211ENST00000482052 1765 ntBASIC25.66■■□□□ 1.7
VPS16Q9H269 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS16Q9H269 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS16Q9H269 ABCB10P4-201ENST00000566803 2184 ntBASIC25.65■■□□□ 1.7
VPS16Q9H269 FOXO3B-201ENST00000395675 1928 ntBASIC25.65■■□□□ 1.7
VPS16Q9H269 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS16Q9H269 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS16Q9H269 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS16Q9H269 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS16Q9H269 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS16Q9H269 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS16Q9H269 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.64■■□□□ 1.69
VPS16Q9H269 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS16Q9H269 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS16Q9H269 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VPS16Q9H269 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
VPS16Q9H269 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS16Q9H269 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS16Q9H269 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VPS16Q9H269 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.62■■□□□ 1.69
VPS16Q9H269 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS16Q9H269 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.62■■□□□ 1.69
VPS16Q9H269 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS16Q9H269 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
VPS16Q9H269 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
VPS16Q9H269 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
VPS16Q9H269 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS16Q9H269 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms