Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 AC133561.1-201ENST00000568600 2415 ntBASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
FOXRED1Q96CU9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 AC025884.2-201ENST00000553429 711 ntBASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXRED1Q96CU9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXRED1Q96CU9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXRED1Q96CU9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXRED1Q96CU9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXRED1Q96CU9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXRED1Q96CU9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
FOXRED1Q96CU9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXRED1Q96CU9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXRED1Q96CU9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 HSD17B1P1-201ENST00000590052 955 ntBASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXRED1Q96CU9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 DUSP8P5-201ENST00000422884 1815 ntBASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXRED1Q96CU9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXRED1Q96CU9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms