Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNRF1Q8ND25 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNRF1Q8ND25 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNRF1Q8ND25 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNRF1Q8ND25 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNRF1Q8ND25 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 AC019171.1-201ENST00000601251 1056 ntBASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 PVT1_1.1-201ENST00000615125 194 ntBASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZNRF1Q8ND25 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 AL592295.1-201ENST00000400984 884 ntBASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNRF1Q8ND25 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNRF1Q8ND25 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNRF1Q8ND25 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNRF1Q8ND25 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNRF1Q8ND25 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNRF1Q8ND25 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNRF1Q8ND25 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNRF1Q8ND25 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNRF1Q8ND25 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNRF1Q8ND25 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNRF1Q8ND25 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNRF1Q8ND25 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 AP003733.4-201ENST00000623785 1697 ntBASIC19.56■□□□□ 0.72
ZNRF1Q8ND25 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF1Q8ND25 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 KRT8P33-201ENST00000508125 1423 ntBASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 AC022616.5-201ENST00000518796 181 ntBASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 MIR6089-201ENST00000616698 64 ntBASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF1Q8ND25 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNRF1Q8ND25 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNRF1Q8ND25 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNRF1Q8ND25 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms