Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD2Q8IV50 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD2Q8IV50 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 LINC00526-201ENST00000581067 1875 ntBASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 AC110285.7-201ENST00000624417 1536 ntBASIC20.58■□□□□ 0.88
LYSMD2Q8IV50 SLC6A10P-202ENST00000431994 2058 ntBASIC20.57■□□□□ 0.88
LYSMD2Q8IV50 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD2Q8IV50 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.57■□□□□ 0.88
LYSMD2Q8IV50 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD2Q8IV50 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD2Q8IV50 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 AC127496.7-201ENST00000625110 1798 ntBASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.55■□□□□ 0.88
LYSMD2Q8IV50 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LYSMD2Q8IV50 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD2Q8IV50 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD2Q8IV50 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LYSMD2Q8IV50 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 SUZ12P1-203ENST00000578195 985 ntBASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD2Q8IV50 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms