Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.17■■□□□ 1.62
VPS36Q86VN1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.17■■□□□ 1.62
VPS36Q86VN1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS36Q86VN1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
VPS36Q86VN1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS36Q86VN1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.16■■□□□ 1.62
VPS36Q86VN1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.16■■□□□ 1.62
VPS36Q86VN1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.16■■□□□ 1.62
VPS36Q86VN1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS36Q86VN1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.15■■□□□ 1.62
VPS36Q86VN1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS36Q86VN1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS36Q86VN1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS36Q86VN1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS36Q86VN1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
VPS36Q86VN1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
VPS36Q86VN1 AC026202.3-201ENST00000600805 1127 ntBASIC25.14■■□□□ 1.62
VPS36Q86VN1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VPS36Q86VN1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
VPS36Q86VN1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VPS36Q86VN1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS36Q86VN1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS36Q86VN1 RARRES2P2-201ENST00000394842 485 ntBASIC25.13■■□□□ 1.61
VPS36Q86VN1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VPS36Q86VN1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.13■■□□□ 1.61
VPS36Q86VN1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS36Q86VN1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VPS36Q86VN1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
VPS36Q86VN1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.12■■□□□ 1.61
VPS36Q86VN1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
VPS36Q86VN1 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.12■■□□□ 1.61
VPS36Q86VN1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
VPS36Q86VN1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
VPS36Q86VN1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
VPS36Q86VN1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
VPS36Q86VN1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.11■■□□□ 1.61
VPS36Q86VN1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.11■■□□□ 1.61
VPS36Q86VN1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.11■■□□□ 1.61
VPS36Q86VN1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VPS36Q86VN1 RNF126P1-201ENST00000567452 1320 ntBASIC25.11■■□□□ 1.61
VPS36Q86VN1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
VPS36Q86VN1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
VPS36Q86VN1 FOXO3B-201ENST00000395675 1928 ntBASIC25.1■■□□□ 1.61
VPS36Q86VN1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
VPS36Q86VN1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.09■■□□□ 1.61
VPS36Q86VN1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VPS36Q86VN1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
VPS36Q86VN1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VPS36Q86VN1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VPS36Q86VN1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
VPS36Q86VN1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.09■■□□□ 1.61
VPS36Q86VN1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VPS36Q86VN1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VPS36Q86VN1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.08■■□□□ 1.61
VPS36Q86VN1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.08■■□□□ 1.61
VPS36Q86VN1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.08■■□□□ 1.61
VPS36Q86VN1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
VPS36Q86VN1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.08■■□□□ 1.61
VPS36Q86VN1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
VPS36Q86VN1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
VPS36Q86VN1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.07■■□□□ 1.6
VPS36Q86VN1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.07■■□□□ 1.6
VPS36Q86VN1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
VPS36Q86VN1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
VPS36Q86VN1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VPS36Q86VN1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VPS36Q86VN1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
VPS36Q86VN1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VPS36Q86VN1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VPS36Q86VN1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VPS36Q86VN1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.05■■□□□ 1.6
VPS36Q86VN1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
VPS36Q86VN1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
VPS36Q86VN1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.04■■□□□ 1.6
VPS36Q86VN1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.04■■□□□ 1.6
VPS36Q86VN1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
VPS36Q86VN1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
VPS36Q86VN1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
VPS36Q86VN1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
VPS36Q86VN1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.03■■□□□ 1.6
VPS36Q86VN1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.03■■□□□ 1.6
VPS36Q86VN1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
VPS36Q86VN1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
VPS36Q86VN1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms