Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AL162430.1-201ENST00000480705 870 ntBASIC28.29■■■□□ 2.12
USP50Q70EL3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.28■■■□□ 2.12
USP50Q70EL3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
USP50Q70EL3 AP001330.3-201ENST00000520123 633 ntBASIC28.28■■■□□ 2.12
USP50Q70EL3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
USP50Q70EL3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.28■■■□□ 2.12
USP50Q70EL3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.28■■■□□ 2.12
USP50Q70EL3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
USP50Q70EL3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
USP50Q70EL3 AC091305.1-201ENST00000479476 895 ntBASIC28.27■■■□□ 2.12
USP50Q70EL3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.27■■■□□ 2.12
USP50Q70EL3 AC087623.3-201ENST00000607047 1098 ntBASIC28.27■■■□□ 2.12
USP50Q70EL3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
USP50Q70EL3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.27■■■□□ 2.12
USP50Q70EL3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
USP50Q70EL3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
USP50Q70EL3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.26■■■□□ 2.11
USP50Q70EL3 DUX4L19-201ENST00000557448 1267 ntBASIC28.26■■■□□ 2.11
USP50Q70EL3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.26■■■□□ 2.11
USP50Q70EL3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
USP50Q70EL3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.11
USP50Q70EL3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
USP50Q70EL3 DRD5P2-201ENST00000421395 2012 ntBASIC28.25■■■□□ 2.11
USP50Q70EL3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
USP50Q70EL3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.25■■■□□ 2.11
USP50Q70EL3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
USP50Q70EL3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.24■■■□□ 2.11
USP50Q70EL3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
USP50Q70EL3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
USP50Q70EL3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
USP50Q70EL3 LINC01003-201ENST00000564834 1764 ntBASIC28.24■■■□□ 2.11
USP50Q70EL3 AC004448.1-201ENST00000458332 883 ntBASIC28.23■■■□□ 2.11
USP50Q70EL3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
USP50Q70EL3 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.23■■■□□ 2.11
USP50Q70EL3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
USP50Q70EL3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
USP50Q70EL3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
USP50Q70EL3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
USP50Q70EL3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USP50Q70EL3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.21■■■□□ 2.11
USP50Q70EL3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.21■■■□□ 2.11
USP50Q70EL3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USP50Q70EL3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USP50Q70EL3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
USP50Q70EL3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
USP50Q70EL3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
USP50Q70EL3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.2■■■□□ 2.1
USP50Q70EL3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
USP50Q70EL3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
USP50Q70EL3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
USP50Q70EL3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
USP50Q70EL3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.18■■■□□ 2.1
USP50Q70EL3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
USP50Q70EL3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.17■■■□□ 2.1
USP50Q70EL3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.17■■■□□ 2.1
USP50Q70EL3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.17■■■□□ 2.1
USP50Q70EL3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
USP50Q70EL3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
USP50Q70EL3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
USP50Q70EL3 FOXO3B-201ENST00000395675 1928 ntBASIC28.16■■■□□ 2.1
USP50Q70EL3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
USP50Q70EL3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
USP50Q70EL3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 CA15P2-201ENST00000611168 834 ntBASIC28.15■■■□□ 2.1
USP50Q70EL3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.15■■■□□ 2.1
USP50Q70EL3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
USP50Q70EL3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
USP50Q70EL3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
USP50Q70EL3 RASA4CP-201ENST00000424092 1398 ntBASIC28.14■■■□□ 2.1
USP50Q70EL3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
USP50Q70EL3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
USP50Q70EL3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.14■■■□□ 2.1
USP50Q70EL3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
USP50Q70EL3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.13■■■□□ 2.09
USP50Q70EL3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.13■■■□□ 2.09
USP50Q70EL3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
USP50Q70EL3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
USP50Q70EL3 ABCB10P1-201ENST00000614297 2181 ntBASIC28.12■■■□□ 2.09
USP50Q70EL3 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.12■■■□□ 2.09
USP50Q70EL3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.12■■■□□ 2.09
USP50Q70EL3 MIR4767-201ENST00000582827 78 ntBASIC28.12■■■□□ 2.09
USP50Q70EL3 AP004609.3-201ENST00000610705 1884 ntBASIC28.12■■■□□ 2.09
USP50Q70EL3 SYT6-210ENST00000641643 1587 ntBASIC28.11■■■□□ 2.09
USP50Q70EL3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
USP50Q70EL3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.11■■■□□ 2.09
USP50Q70EL3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
USP50Q70EL3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
USP50Q70EL3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.11■■■□□ 2.09
USP50Q70EL3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.11■■■□□ 2.09
USP50Q70EL3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
USP50Q70EL3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms