Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.77■□□□□ 0.43
CDPF1Q6NVV7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 DUSP8P3-201ENST00000399571 1760 ntBASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDPF1Q6NVV7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDPF1Q6NVV7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDPF1Q6NVV7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDPF1Q6NVV7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDPF1Q6NVV7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDPF1Q6NVV7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 FOXO3B-201ENST00000395675 1928 ntBASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDPF1Q6NVV7 WHAMMP2-203ENST00000563942 1603 ntBASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.69■□□□□ 0.42
CDPF1Q6NVV7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 LINC00526-201ENST00000581067 1875 ntBASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.68■□□□□ 0.42
CDPF1Q6NVV7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.67■□□□□ 0.42
CDPF1Q6NVV7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDPF1Q6NVV7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDPF1Q6NVV7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDPF1Q6NVV7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms