Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 tN(GUU)N2tN(GUU)N2 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)O1tN(GUU)O1 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)O2tN(GUU)O2 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)PtN(GUU)P 74 nt5.86□□□□□ -1.47
DNL4Q08387 TAL1YLR354C 1008 nt5.86□□□□□ -1.47
DNL4Q08387 PAP2YOL115W 1755 nt5.85□□□□□ -1.47
DNL4Q08387 PRO3YER023W 861 nt5.85□□□□□ -1.47
DNL4Q08387 PHO86YJL117W 936 nt5.85□□□□□ -1.47
DNL4Q08387 YJL193WYJL193W 1209 nt5.85□□□□□ -1.47
DNL4Q08387 YOL097W-AYOL097W-A 186 nt5.85□□□□□ -1.47
DNL4Q08387 SSO1YPL232W 873 nt5.85□□□□□ -1.47
DNL4Q08387 YTH1YPR107C 627 nt5.85□□□□□ -1.47
DNL4Q08387 KTR3YBR205W 1215 nt5.85□□□□□ -1.47
DNL4Q08387 OPT1YJL212C 2400 nt5.84□□□□□ -1.47
DNL4Q08387 CLP1YOR250C 1338 nt5.84□□□□□ -1.47
DNL4Q08387 SLO1YER180C-A 258 nt5.84□□□□□ -1.47
DNL4Q08387 SNZ3YFL059W 897 nt5.84□□□□□ -1.47
DNL4Q08387 YGL194C-AYGL194C-A 243 nt5.84□□□□□ -1.47
DNL4Q08387 CDC11YJR076C 1248 nt5.84□□□□□ -1.47
DNL4Q08387 SNZ2YNL333W 897 nt5.84□□□□□ -1.47
DNL4Q08387 BUL1YMR275C 2931 nt5.84□□□□□ -1.48
DNL4Q08387 RRN3YKL125W 1884 nt5.83□□□□□ -1.48
DNL4Q08387 PRM10YJL108C 1152 nt5.83□□□□□ -1.48
DNL4Q08387 COS9YKL219W 1224 nt5.83□□□□□ -1.48
DNL4Q08387 PGA3YML125C 939 nt5.83□□□□□ -1.48
DNL4Q08387 VMA4YOR332W 702 nt5.83□□□□□ -1.48
DNL4Q08387 HST2YPL015C 1074 nt5.83□□□□□ -1.48
DNL4Q08387 RIM101YHL027W 1878 nt5.83□□□□□ -1.48
DNL4Q08387 EPS1YIL005W 2106 nt5.83□□□□□ -1.48
DNL4Q08387 MHR1YDR296W 681 nt5.82□□□□□ -1.48
DNL4Q08387 RPT6YGL048C 1218 nt5.82□□□□□ -1.48
DNL4Q08387 TRK2YKR050W 2670 nt5.82□□□□□ -1.48
DNL4Q08387 SMF2YHR050W 1650 nt5.82□□□□□ -1.48
DNL4Q08387 GUF1YLR289W 1938 nt5.82□□□□□ -1.48
DNL4Q08387 MSN2YMR037C 2115 nt5.81□□□□□ -1.48
DNL4Q08387 NOB1YOR056C 1380 nt5.81□□□□□ -1.48
DNL4Q08387 VPS4YPR173C 1314 nt5.81□□□□□ -1.48
DNL4Q08387 CBC2YPL178W 627 nt5.81□□□□□ -1.48
DNL4Q08387 SHE10YGL228W 1734 nt5.81□□□□□ -1.48
DNL4Q08387 PWP1YLR196W 1731 nt5.81□□□□□ -1.48
DNL4Q08387 EIS1YMR031C 2532 nt5.81□□□□□ -1.48
DNL4Q08387 YNL095CYNL095C 1929 nt5.8□□□□□ -1.48
DNL4Q08387 NHP6BYBR089C-A 300 nt5.8□□□□□ -1.48
DNL4Q08387 MID1YNL291C 1647 nt5.79□□□□□ -1.48
DNL4Q08387 YLR283WYLR283W 945 nt5.79□□□□□ -1.48
DNL4Q08387 YOR318CYOR318C 306 nt5.79□□□□□ -1.48
DNL4Q08387 UGO1YDR470C 1509 nt5.79□□□□□ -1.48
DNL4Q08387 UBA1YKL210W 3075 nt5.78□□□□□ -1.48
DNL4Q08387 VTC2YFL004W 2487 nt5.78□□□□□ -1.48
DNL4Q08387 SAM4YPL273W 978 nt5.78□□□□□ -1.48
DNL4Q08387 TEF1YPR080W 1377 nt5.78□□□□□ -1.48
DNL4Q08387 TEF2YBR118W 1377 nt5.78□□□□□ -1.48
DNL4Q08387 PYC1YGL062W 3537 nt5.78□□□□□ -1.48
DNL4Q08387 MMP1YLL061W 1752 nt5.78□□□□□ -1.48
DNL4Q08387 TAH18YPR048W 1872 nt5.77□□□□□ -1.49
DNL4Q08387 RSC2YLR357W 2670 nt5.77□□□□□ -1.49
DNL4Q08387 GET3YDL100C 1065 nt5.77□□□□□ -1.49
DNL4Q08387 RHO3YIL118W 696 nt5.77□□□□□ -1.49
DNL4Q08387 PUS5YLR165C 765 nt5.77□□□□□ -1.49
DNL4Q08387 RPS15YOL040C 429 nt5.77□□□□□ -1.49
DNL4Q08387 CAM1YPL048W 1248 nt5.77□□□□□ -1.49
DNL4Q08387 snR32snR32 188 nt5.77□□□□□ -1.49
DNL4Q08387 ACS2YLR153C 2052 nt5.77□□□□□ -1.49
DNL4Q08387 BUD14YAR014C 2130 nt5.76□□□□□ -1.49
DNL4Q08387 GFD1YMR255W 567 nt5.76□□□□□ -1.49
DNL4Q08387 YPL062WYPL062W 405 nt5.76□□□□□ -1.49
DNL4Q08387 NDC1YML031W 1968 nt5.76□□□□□ -1.49
DNL4Q08387 STL1YDR536W 1710 nt5.76□□□□□ -1.49
DNL4Q08387 YEH1YLL012W 1722 nt5.76□□□□□ -1.49
DNL4Q08387 MNN2YBR015C 1794 nt5.75□□□□□ -1.49
DNL4Q08387 YNR048WYNR048W 1182 nt5.75□□□□□ -1.49
DNL4Q08387 RRT2YBR246W 1164 nt5.75□□□□□ -1.49
DNL4Q08387 MCX1YBR227C 1563 nt5.75□□□□□ -1.49
DNL4Q08387 RPT1YKL145W 1404 nt5.74□□□□□ -1.49
DNL4Q08387 PHO8YDR481C 1701 nt5.74□□□□□ -1.49
DNL4Q08387 DBF4YDR052C 2115 nt5.74□□□□□ -1.49
DNL4Q08387 TRP1YDR007W 675 nt5.74□□□□□ -1.49
DNL4Q08387 RPL7AYGL076C 735 nt5.74□□□□□ -1.49
DNL4Q08387 tX(XXX)DtX(XXX)D 100 nt5.74□□□□□ -1.49
DNL4Q08387 RDL2YOR286W 450 nt5.74□□□□□ -1.49
DNL4Q08387 RPL7BYPL198W 735 nt5.74□□□□□ -1.49
DNL4Q08387 YPR195CYPR195C 330 nt5.74□□□□□ -1.49
DNL4Q08387 VID30YGL227W 2877 nt5.74□□□□□ -1.49
DNL4Q08387 YDR401WYDR401W 564 nt5.73□□□□□ -1.49
DNL4Q08387 PHM8YER037W 966 nt5.73□□□□□ -1.49
DNL4Q08387 FHN1YGR131W 525 nt5.73□□□□□ -1.49
DNL4Q08387 CLB1YGR108W 1416 nt5.73□□□□□ -1.49
DNL4Q08387 TOS4YLR183C 1470 nt5.72□□□□□ -1.49
DNL4Q08387 YDL023CYDL023C 321 nt5.72□□□□□ -1.49
DNL4Q08387 SCW4YGR279C 1161 nt5.72□□□□□ -1.49
DNL4Q08387 IPI1YHR085W 1005 nt5.72□□□□□ -1.49
DNL4Q08387 SFC1YJR095W 969 nt5.72□□□□□ -1.49
DNL4Q08387 TFB4YPR056W 1017 nt5.72□□□□□ -1.49
DNL4Q08387 RAD53YPL153C 2466 nt5.72□□□□□ -1.49
DNL4Q08387 GEP3YOR205C 1671 nt5.72□□□□□ -1.49
DNL4Q08387 RRP45YDR280W 918 nt5.71□□□□□ -1.5
DNL4Q08387 YHR127WYHR127W 732 nt5.71□□□□□ -1.5
DNL4Q08387 ATP14YLR295C 375 nt5.71□□□□□ -1.5
DNL4Q08387 UBC4YBR082C 447 nt5.71□□□□□ -1.5
DNL4Q08387 UTP7YER082C 1665 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms