Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 UBC4YBR082C 447 nt5.64□□□□□ -1.51
YNL040WP53960 SUB2YDL084W 1341 nt5.64□□□□□ -1.51
YNL040WP53960 SSZ1YHR064C 1617 nt5.63□□□□□ -1.51
YNL040WP53960 ADY2YCR010C 852 nt5.63□□□□□ -1.51
YNL040WP53960 MTQ2YDR140W 666 nt5.63□□□□□ -1.51
YNL040WP53960 YOL097W-AYOL097W-A 186 nt5.63□□□□□ -1.51
YNL040WP53960 YPR195CYPR195C 330 nt5.63□□□□□ -1.51
YNL040WP53960 SSY5YJL156C 2100 nt5.62□□□□□ -1.51
YNL040WP53960 GLO2YDR272W 825 nt5.62□□□□□ -1.51
YNL040WP53960 YDR541CYDR541C 1035 nt5.62□□□□□ -1.51
YNL040WP53960 RRP46YGR095C 672 nt5.62□□□□□ -1.51
YNL040WP53960 ELA1YNL230C 1140 nt5.62□□□□□ -1.51
YNL040WP53960 RTT106YNL206C 1368 nt5.62□□□□□ -1.51
YNL040WP53960 DED81YHR019C 1665 nt5.62□□□□□ -1.51
YNL040WP53960 NSE5YML023C 1671 nt5.62□□□□□ -1.51
YNL040WP53960 GEP3YOR205C 1671 nt5.62□□□□□ -1.51
YNL040WP53960 NRD1YNL251C 1728 nt5.62□□□□□ -1.51
YNL040WP53960 RHB1YCR027C 630 nt5.61□□□□□ -1.51
YNL040WP53960 YHR045WYHR045W 1683 nt5.61□□□□□ -1.51
YNL040WP53960 MND2YIR025W 1107 nt5.61□□□□□ -1.51
YNL040WP53960 RMA1YKL132C 1293 nt5.61□□□□□ -1.51
YNL040WP53960 ALT1YLR089C 1779 nt5.61□□□□□ -1.51
YNL040WP53960 MRPL15YLR312W-A 762 nt5.61□□□□□ -1.51
YNL040WP53960 ATF1YOR377W 1578 nt5.6□□□□□ -1.51
YNL040WP53960 YPL277CYPL277C 1464 nt5.6□□□□□ -1.51
YNL040WP53960 SNT2YGL131C 4212 nt5.6□□□□□ -1.51
YNL040WP53960 BRL1YHR036W 1416 nt5.59□□□□□ -1.51
YNL040WP53960 CDC43YGL155W 1131 nt5.59□□□□□ -1.51
YNL040WP53960 PGU1YJR153W 1086 nt5.59□□□□□ -1.51
YNL040WP53960 ARG1YOL058W 1263 nt5.59□□□□□ -1.51
YNL040WP53960 CWC27YPL064C 906 nt5.59□□□□□ -1.51
YNL040WP53960 NUD1YOR373W 2556 nt5.59□□□□□ -1.52
YNL040WP53960 VHS1YDR247W 1386 nt5.58□□□□□ -1.52
YNL040WP53960 TAX4YJL083W 1815 nt5.58□□□□□ -1.52
YNL040WP53960 RSC30YHR056C 2652 nt5.58□□□□□ -1.52
YNL040WP53960 YJR115WYJR115W 510 nt5.58□□□□□ -1.52
YNL040WP53960 MPA43YNL249C 1629 nt5.58□□□□□ -1.52
YNL040WP53960 RGT1YKL038W 3513 nt5.58□□□□□ -1.52
YNL040WP53960 SMF3YLR034C 1422 nt5.57□□□□□ -1.52
YNL040WP53960 YLR194CYLR194C 765 nt5.57□□□□□ -1.52
YNL040WP53960 VTH1YIL173W 4650 nt5.57□□□□□ -1.52
YNL040WP53960 VTH2YJL222W 4650 nt5.57□□□□□ -1.52
YNL040WP53960 UBX2YML013W 1755 nt5.57□□□□□ -1.52
YNL040WP53960 CHS5YLR330W 2016 nt5.57□□□□□ -1.52
YNL040WP53960 UBA1YKL210W 3075 nt5.56□□□□□ -1.52
YNL040WP53960 ROG3YFR022W 2202 nt5.56□□□□□ -1.52
YNL040WP53960 DPH2YKL191W 1605 nt5.56□□□□□ -1.52
YNL040WP53960 HRP1YOL123W 1605 nt5.56□□□□□ -1.52
YNL040WP53960 YFL034WYFL034W 3222 nt5.56□□□□□ -1.52
YNL040WP53960 MAL11YGR289C 1851 nt5.56□□□□□ -1.52
YNL040WP53960 GCS1YDL226C 1059 nt5.56□□□□□ -1.52
YNL040WP53960 CBC2YPL178W 627 nt5.56□□□□□ -1.52
YNL040WP53960 DAK1YML070W 1755 nt5.56□□□□□ -1.52
YNL040WP53960 TOS4YLR183C 1470 nt5.56□□□□□ -1.52
YNL040WP53960 ACC1YNR016C 6702 nt5.55□□□□□ -1.52
YNL040WP53960 COG1YGL223C 1254 nt5.55□□□□□ -1.52
YNL040WP53960 PRS1YKL181W 1284 nt5.55□□□□□ -1.52
YNL040WP53960 YKR041WYKR041W 753 nt5.55□□□□□ -1.52
YNL040WP53960 HXT17YNR072W 1695 nt5.55□□□□□ -1.52
YNL040WP53960 CST6YIL036W 1764 nt5.55□□□□□ -1.52
YNL040WP53960 PPR1YLR014C 2715 nt5.54□□□□□ -1.52
YNL040WP53960 VMA16YHR026W 642 nt5.54□□□□□ -1.52
YNL040WP53960 SYN8YAL014C 768 nt5.54□□□□□ -1.52
YNL040WP53960 MTW1YAL034W-A 870 nt5.54□□□□□ -1.52
YNL040WP53960 TRP5YGL026C 2124 nt5.54□□□□□ -1.52
YNL040WP53960 PCS60YBR222C 1632 nt5.53□□□□□ -1.52
YNL040WP53960 OXP1YKL215C 3861 nt5.53□□□□□ -1.52
YNL040WP53960 FOL1YNL256W 2475 nt5.53□□□□□ -1.52
YNL040WP53960 GAA1YLR088W 1845 nt5.53□□□□□ -1.52
YNL040WP53960 BIT2YBR270C 1638 nt5.52□□□□□ -1.53
YNL040WP53960 QRI1YDL103C 1434 nt5.52□□□□□ -1.53
YNL040WP53960 DUG1YFR044C 1446 nt5.52□□□□□ -1.53
YNL040WP53960 FZF1YGL254W 900 nt5.52□□□□□ -1.53
YNL040WP53960 SCW4YGR279C 1161 nt5.52□□□□□ -1.53
YNL040WP53960 IPI1YHR085W 1005 nt5.52□□□□□ -1.53
YNL040WP53960 YML101C-AYML101C-A 318 nt5.52□□□□□ -1.53
YNL040WP53960 RSC2YLR357W 2670 nt5.52□□□□□ -1.53
YNL040WP53960 BRF1YGR246C 1791 nt5.52□□□□□ -1.53
YNL040WP53960 TIM54YJL054W 1437 nt5.51□□□□□ -1.53
YNL040WP53960 ARP2YDL029W 1176 nt5.51□□□□□ -1.53
YNL040WP53960 ROX3YBL093C 663 nt5.51□□□□□ -1.53
YNL040WP53960 KTR3YBR205W 1215 nt5.51□□□□□ -1.53
YNL040WP53960 ATE1YGL017W 1512 nt5.51□□□□□ -1.53
YNL040WP53960 YFR006WYFR006W 1608 nt5.51□□□□□ -1.53
YNL040WP53960 ULA1YPL003W 1389 nt5.51□□□□□ -1.53
YNL040WP53960 OPT1YJL212C 2400 nt5.5□□□□□ -1.53
YNL040WP53960 TDH3YGR192C 999 nt5.5□□□□□ -1.53
YNL040WP53960 YHR127WYHR127W 732 nt5.5□□□□□ -1.53
YNL040WP53960 MRPL13YKR006C 795 nt5.5□□□□□ -1.53
YNL040WP53960 YLR118CYLR118C 684 nt5.5□□□□□ -1.53
YNL040WP53960 RPS19BYNL302C 435 nt5.5□□□□□ -1.53
YNL040WP53960 GPM3YOL056W 912 nt5.5□□□□□ -1.53
YNL040WP53960 SPS22YCL048W 1392 nt5.5□□□□□ -1.53
YNL040WP53960 RRN3YKL125W 1884 nt5.49□□□□□ -1.53
YNL040WP53960 PHO8YDR481C 1701 nt5.49□□□□□ -1.53
YNL040WP53960 snR10snR10 245 nt5.49□□□□□ -1.53
YNL040WP53960 YFL052WYFL052W 1398 nt5.49□□□□□ -1.53
YNL040WP53960 CMR1YDL156W 1569 nt5.49□□□□□ -1.53
YNL040WP53960 CRZ1YNL027W 2037 nt5.48□□□□□ -1.53
YNL040WP53960 BPL1YDL141W 2073 nt5.48□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms