Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR4A2P43354 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.02■□□□□ 0.96
NR4A2P43354 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR4A2P43354 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NR4A2P43354 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.02■□□□□ 0.96
NR4A2P43354 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR4A2P43354 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.02■□□□□ 0.96
NR4A2P43354 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR4A2P43354 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.02■□□□□ 0.96
NR4A2P43354 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NR4A2P43354 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NR4A2P43354 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NR4A2P43354 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.01■□□□□ 0.95
NR4A2P43354 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.01■□□□□ 0.95
NR4A2P43354 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR4A2P43354 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
NR4A2P43354 WHAMMP3-201ENST00000611636 1609 ntBASIC21■□□□□ 0.95
NR4A2P43354 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21■□□□□ 0.95
NR4A2P43354 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR4A2P43354 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR4A2P43354 TSPY13P-201ENST00000338964 914 ntBASIC21■□□□□ 0.95
NR4A2P43354 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21■□□□□ 0.95
NR4A2P43354 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21■□□□□ 0.95
NR4A2P43354 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
NR4A2P43354 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.99■□□□□ 0.95
NR4A2P43354 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.99■□□□□ 0.95
NR4A2P43354 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.99■□□□□ 0.95
NR4A2P43354 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
NR4A2P43354 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR4A2P43354 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR4A2P43354 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR4A2P43354 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR4A2P43354 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR4A2P43354 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NR4A2P43354 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
NR4A2P43354 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR4A2P43354 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR4A2P43354 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
NR4A2P43354 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.97■□□□□ 0.95
NR4A2P43354 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR4A2P43354 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NR4A2P43354 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NR4A2P43354 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.97■□□□□ 0.95
NR4A2P43354 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.97■□□□□ 0.95
NR4A2P43354 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR4A2P43354 AC004987.1-201ENST00000428627 508 ntBASIC20.97■□□□□ 0.95
NR4A2P43354 ATP5G2P3-201ENST00000429083 425 ntBASIC20.97■□□□□ 0.95
NR4A2P43354 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NR4A2P43354 AC007029.1-201ENST00000604183 313 ntBASIC20.97■□□□□ 0.95
NR4A2P43354 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR4A2P43354 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NR4A2P43354 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NR4A2P43354 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NR4A2P43354 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NR4A2P43354 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NR4A2P43354 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.96■□□□□ 0.95
NR4A2P43354 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR4A2P43354 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR4A2P43354 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR4A2P43354 AL359258.2-201ENST00000564063 1566 ntBASIC20.95■□□□□ 0.94
NR4A2P43354 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.95■□□□□ 0.94
NR4A2P43354 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.95■□□□□ 0.94
NR4A2P43354 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.95■□□□□ 0.94
NR4A2P43354 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.95■□□□□ 0.94
NR4A2P43354 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR4A2P43354 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR4A2P43354 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NR4A2P43354 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR4A2P43354 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.94■□□□□ 0.94
NR4A2P43354 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.94■□□□□ 0.94
NR4A2P43354 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NR4A2P43354 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR4A2P43354 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR4A2P43354 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
NR4A2P43354 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR4A2P43354 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.93■□□□□ 0.94
NR4A2P43354 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
NR4A2P43354 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
NR4A2P43354 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR4A2P43354 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NR4A2P43354 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.93■□□□□ 0.94
NR4A2P43354 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms