Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CXCL5P42830 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL5P42830 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL5P42830 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CXCL5P42830 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.7■□□□□ 0.1
CXCL5P42830 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CXCL5P42830 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL5P42830 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CXCL5P42830 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL5P42830 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CXCL5P42830 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCL5P42830 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.69■□□□□ 0.1
CXCL5P42830 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.69■□□□□ 0.1
CXCL5P42830 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CXCL5P42830 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CXCL5P42830 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCL5P42830 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCL5P42830 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CXCL5P42830 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL5P42830 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL5P42830 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL5P42830 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CXCL5P42830 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 MIR6089-201ENST00000616698 64 ntBASIC15.67■□□□□ 0.1
CXCL5P42830 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL5P42830 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CXCL5P42830 AC068473.5-201ENST00000616428 2072 ntBASIC15.67■□□□□ 0.1
CXCL5P42830 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL5P42830 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL5P42830 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL5P42830 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL5P42830 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL5P42830 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL5P42830 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL5P42830 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL5P42830 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL5P42830 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL5P42830 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL5P42830 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.65■□□□□ 0.1
CXCL5P42830 MIR3960-201ENST00000583311 91 ntBASIC15.65■□□□□ 0.1
CXCL5P42830 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CXCL5P42830 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL5P42830 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL5P42830 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCL5P42830 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL5P42830 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
CXCL5P42830 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCL5P42830 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL5P42830 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL5P42830 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL5P42830 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL5P42830 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL5P42830 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCL5P42830 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL5P42830 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCL5P42830 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.64■□□□□ 0.09
CXCL5P42830 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CXCL5P42830 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCL5P42830 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL5P42830 PKD1P6-201ENST00000343738 4769 ntBASIC15.63■□□□□ 0.09
CXCL5P42830 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL5P42830 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL5P42830 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CXCL5P42830 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL5P42830 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms