Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 ARE2YNR019W 1929 nt4.76□□□□□ -1.65
CDC40P40968 KCC4YCL024W 3114 nt4.76□□□□□ -1.65
CDC40P40968 YDR053WYDR053W 396 nt4.76□□□□□ -1.65
CDC40P40968 YHR193C-AYHR193C-A 375 nt4.76□□□□□ -1.65
CDC40P40968 YRB2YIL063C 984 nt4.76□□□□□ -1.65
CDC40P40968 GCV3YAL044C 513 nt4.76□□□□□ -1.65
CDC40P40968 GTR1YML121W 933 nt4.76□□□□□ -1.65
CDC40P40968 PDC1YLR044C 1692 nt4.76□□□□□ -1.65
CDC40P40968 PKC1YBL105C 3456 nt4.76□□□□□ -1.65
CDC40P40968 RRN3YKL125W 1884 nt4.75□□□□□ -1.65
CDC40P40968 BIO3YNR058W 1443 nt4.75□□□□□ -1.65
CDC40P40968 SAP155YFR040W 3009 nt4.75□□□□□ -1.65
CDC40P40968 SIP2YGL208W 1248 nt4.75□□□□□ -1.65
CDC40P40968 CSM2YIL132C 642 nt4.75□□□□□ -1.65
CDC40P40968 HEM15YOR176W 1182 nt4.75□□□□□ -1.65
CDC40P40968 TAE1YBR261C 699 nt4.75□□□□□ -1.65
CDC40P40968 SMF2YHR050W 1650 nt4.75□□□□□ -1.65
CDC40P40968 FRS2YFL022C 1512 nt4.75□□□□□ -1.65
CDC40P40968 ASF2YDL197C 1578 nt4.74□□□□□ -1.65
CDC40P40968 HSP78YDR258C 2436 nt4.74□□□□□ -1.65
CDC40P40968 KKQ8YKL168C 2175 nt4.74□□□□□ -1.65
CDC40P40968 RAM1YDL090C 1296 nt4.74□□□□□ -1.65
CDC40P40968 FMO1YHR176W 1299 nt4.74□□□□□ -1.65
CDC40P40968 YHR213W-BYHR213W-B 300 nt4.74□□□□□ -1.65
CDC40P40968 YAR064WYAR064W 300 nt4.74□□□□□ -1.65
CDC40P40968 SMA1YPL027W 738 nt4.74□□□□□ -1.65
CDC40P40968 SLD2YKL108W 1362 nt4.74□□□□□ -1.65
CDC40P40968 HXT3YDR345C 1704 nt4.74□□□□□ -1.65
CDC40P40968 AMD2YDR242W 1650 nt4.73□□□□□ -1.65
CDC40P40968 ARN1YHL040C 1884 nt4.73□□□□□ -1.65
CDC40P40968 SIA1YOR137C 1869 nt4.73□□□□□ -1.65
CDC40P40968 BLM10YFL007W 6432 nt4.73□□□□□ -1.65
CDC40P40968 GRX4YER174C 735 nt4.73□□□□□ -1.65
CDC40P40968 CAB4YGR277C 918 nt4.73□□□□□ -1.65
CDC40P40968 ASF1YJL115W 840 nt4.73□□□□□ -1.65
CDC40P40968 YNR040WYNR040W 771 nt4.73□□□□□ -1.65
CDC40P40968 MMR1YLR190W 1476 nt4.73□□□□□ -1.65
CDC40P40968 KRS1YDR037W 1776 nt4.73□□□□□ -1.65
CDC40P40968 VHS2YIL135C 1311 nt4.72□□□□□ -1.65
CDC40P40968 EXO1YOR033C 2109 nt4.72□□□□□ -1.65
CDC40P40968 UBC6YER100W 753 nt4.72□□□□□ -1.65
CDC40P40968 YKL102CYKL102C 306 nt4.72□□□□□ -1.65
CDC40P40968 RRT7YLL030C 342 nt4.72□□□□□ -1.65
CDC40P40968 YLR346CYLR346C 306 nt4.72□□□□□ -1.65
CDC40P40968 LDB7YBL006C 543 nt4.72□□□□□ -1.65
CDC40P40968 SPG4YMR107W 348 nt4.72□□□□□ -1.65
CDC40P40968 OSW5YMR148W 447 nt4.72□□□□□ -1.65
CDC40P40968 YNL067W-AYNL067W-A 147 nt4.72□□□□□ -1.65
CDC40P40968 HSF1YGL073W 2502 nt4.72□□□□□ -1.65
CDC40P40968 NOT3YIL038C 2511 nt4.72□□□□□ -1.65
CDC40P40968 DBF4YDR052C 2115 nt4.72□□□□□ -1.65
CDC40P40968 CRH1YGR189C 1524 nt4.72□□□□□ -1.65
CDC40P40968 CRF1YDR223W 1404 nt4.72□□□□□ -1.65
CDC40P40968 MCX1YBR227C 1563 nt4.71□□□□□ -1.66
CDC40P40968 GPD1YDL022W 1176 nt4.71□□□□□ -1.66
CDC40P40968 YDL057WYDL057W 987 nt4.71□□□□□ -1.66
CDC40P40968 IDP1YDL066W 1287 nt4.71□□□□□ -1.66
CDC40P40968 YER148W-AYER148W-A 579 nt4.71□□□□□ -1.66
CDC40P40968 YJR085CYJR085C 318 nt4.71□□□□□ -1.66
CDC40P40968 YJU3YKL094W 942 nt4.71□□□□□ -1.66
CDC40P40968 RHO2YNL090W 579 nt4.71□□□□□ -1.66
CDC40P40968 MRPS18YNL306W 654 nt4.71□□□□□ -1.66
CDC40P40968 RRT2YBR246W 1164 nt4.71□□□□□ -1.66
CDC40P40968 LAP2YNL045W 2016 nt4.71□□□□□ -1.66
CDC40P40968 RPT2YDL007W 1314 nt4.71□□□□□ -1.66
CDC40P40968 UBA2YDR390C 1911 nt4.7□□□□□ -1.66
CDC40P40968 LPL1YOR059C 1353 nt4.7□□□□□ -1.66
CDC40P40968 KSS1YGR040W 1107 nt4.7□□□□□ -1.66
CDC40P40968 PAU17YLL025W 375 nt4.7□□□□□ -1.66
CDC40P40968 FZO1YBR179C 2568 nt4.7□□□□□ -1.66
CDC40P40968 RFT1YBL020W 1725 nt4.69□□□□□ -1.66
CDC40P40968 UGX2YDL169C 672 nt4.69□□□□□ -1.66
CDC40P40968 YEL077CYEL077C 3834 nt4.69□□□□□ -1.66
CDC40P40968 PRS1YKL181W 1284 nt4.69□□□□□ -1.66
CDC40P40968 RPC19YNL113W 429 nt4.69□□□□□ -1.66
CDC40P40968 LSC1YOR142W 990 nt4.69□□□□□ -1.66
CDC40P40968 QDR3YBR043C 2070 nt4.69□□□□□ -1.66
CDC40P40968 LYS2YBR115C 4179 nt4.69□□□□□ -1.66
CDC40P40968 RPN5YDL147W 1338 nt4.69□□□□□ -1.66
CDC40P40968 HPF1YOL155C 2904 nt4.69□□□□□ -1.66
CDC40P40968 FUM1YPL262W 1467 nt4.69□□□□□ -1.66
CDC40P40968 CAX4YGR036C 720 nt4.68□□□□□ -1.66
CDC40P40968 YIL028WYIL028W 399 nt4.68□□□□□ -1.66
CDC40P40968 YIL029W-AYIL029W-A 372 nt4.68□□□□□ -1.66
CDC40P40968 SFC1YJR095W 969 nt4.68□□□□□ -1.66
CDC40P40968 YKL153WYKL153W 510 nt4.68□□□□□ -1.66
CDC40P40968 YLR317WYLR317W 435 nt4.68□□□□□ -1.66
CDC40P40968 TAF9YMR236W 474 nt4.68□□□□□ -1.66
CDC40P40968 WTM1YOR230W 1314 nt4.68□□□□□ -1.66
CDC40P40968 PPT1YGR123C 1542 nt4.67□□□□□ -1.66
CDC40P40968 CCT8YJL008C 1707 nt4.67□□□□□ -1.66
CDC40P40968 NRD1YNL251C 1728 nt4.67□□□□□ -1.66
CDC40P40968 GLE2YER107C 1098 nt4.67□□□□□ -1.66
CDC40P40968 RME1YGR044C 903 nt4.67□□□□□ -1.66
CDC40P40968 YGR291CYGR291C 222 nt4.67□□□□□ -1.66
CDC40P40968 tR(ACG)DtR(ACG)D 73 nt4.67□□□□□ -1.66
CDC40P40968 tR(ACG)EtR(ACG)E 73 nt4.67□□□□□ -1.66
CDC40P40968 tR(ACG)KtR(ACG)K 73 nt4.67□□□□□ -1.66
CDC40P40968 tR(ACG)LtR(ACG)L 73 nt4.67□□□□□ -1.66
CDC40P40968 tR(ACG)OtR(ACG)O 73 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 64.2 ms