Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM17P0DL12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMIM17P0DL12 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
SMIM17P0DL12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMIM17P0DL12 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.31■□□□□ 0.36
SMIM17P0DL12 AP003733.4-201ENST00000623785 1697 ntBASIC17.31■□□□□ 0.36
SMIM17P0DL12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM17P0DL12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMIM17P0DL12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM17P0DL12 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM17P0DL12 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM17P0DL12 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM17P0DL12 AC148477.6-201ENST00000623746 465 ntBASIC17.3■□□□□ 0.36
SMIM17P0DL12 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM17P0DL12 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM17P0DL12 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM17P0DL12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM17P0DL12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L13-201ENST00000554103 1267 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L15-201ENST00000611059 1267 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L23-201ENST00000615195 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L24-201ENST00000617576 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L22-201ENST00000618238 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L20-201ENST00000619712 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L21-201ENST00000622058 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L10-201ENST00000622460 1267 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 DUX4L25-201ENST00000624915 1269 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMIM17P0DL12 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM17P0DL12 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM17P0DL12 AL359504.2-201ENST00000605506 1601 ntBASIC17.29■□□□□ 0.36
SMIM17P0DL12 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM17P0DL12 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM17P0DL12 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM17P0DL12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM17P0DL12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.27■□□□□ 0.36
SMIM17P0DL12 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM17P0DL12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM17P0DL12 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM17P0DL12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM17P0DL12 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM17P0DL12 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.26■□□□□ 0.35
SMIM17P0DL12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.26■□□□□ 0.35
SMIM17P0DL12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 AC126177.7-201ENST00000547904 679 ntBASIC17.26■□□□□ 0.35
SMIM17P0DL12 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM17P0DL12 AC068473.5-201ENST00000616428 2072 ntBASIC17.25■□□□□ 0.35
SMIM17P0DL12 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 AC097639.1-201ENST00000565519 1891 ntBASIC17.25■□□□□ 0.35
SMIM17P0DL12 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMIM17P0DL12 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SMIM17P0DL12 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
SMIM17P0DL12 LINC01124-201ENST00000409786 2117 ntBASIC17.25■□□□□ 0.35
SMIM17P0DL12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM17P0DL12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM17P0DL12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM17P0DL12 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM17P0DL12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMIM17P0DL12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM17P0DL12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms