Protein–RNA interactions for Protein: P0CB38

PABPC4L, Polyadenylate-binding protein 4-like, humanhuman

Known RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4LP0CB38 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 AC022413.1-201ENST00000624602 984 ntBASIC22.32■■□□□ 1.16
PABPC4LP0CB38 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PABPC4LP0CB38 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 LINC01124-201ENST00000409786 2117 ntBASIC22.31■■□□□ 1.16
PABPC4LP0CB38 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 GPX1-201ENST00000419349 1106 ntBASIC22.31■■□□□ 1.16
PABPC4LP0CB38 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 HSD17B1P1-201ENST00000590052 955 ntBASIC22.31■■□□□ 1.16
PABPC4LP0CB38 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.31■■□□□ 1.16
PABPC4LP0CB38 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PABPC4LP0CB38 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PABPC4LP0CB38 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.28■■□□□ 1.16
PABPC4LP0CB38 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.27■■□□□ 1.16
PABPC4LP0CB38 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PABPC4LP0CB38 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.27■■□□□ 1.16
PABPC4LP0CB38 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.27■■□□□ 1.16
PABPC4LP0CB38 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.27■■□□□ 1.16
PABPC4LP0CB38 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 AL157400.5-201ENST00000507624 621 ntBASIC22.26■■□□□ 1.15
PABPC4LP0CB38 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.26■■□□□ 1.15
PABPC4LP0CB38 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PABPC4LP0CB38 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PABPC4LP0CB38 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
PABPC4LP0CB38 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.24■■□□□ 1.15
PABPC4LP0CB38 AC060814.1-201ENST00000554326 538 ntBASIC22.24■■□□□ 1.15
PABPC4LP0CB38 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PABPC4LP0CB38 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PABPC4LP0CB38 AL117328.2-201ENST00000624617 1940 ntBASIC22.23■■□□□ 1.15
PABPC4LP0CB38 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 RNF126P1-201ENST00000567452 1320 ntBASIC22.23■■□□□ 1.15
PABPC4LP0CB38 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PABPC4LP0CB38 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PABPC4LP0CB38 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms