Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SOD1P00441 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SOD1P00441 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.28■■□□□ 1.32
SOD1P00441 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SOD1P00441 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SOD1P00441 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOD1P00441 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOD1P00441 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOD1P00441 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.27■■□□□ 1.32
SOD1P00441 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOD1P00441 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.27■■□□□ 1.32
SOD1P00441 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.27■■□□□ 1.32
SOD1P00441 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOD1P00441 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.27■■□□□ 1.32
SOD1P00441 AC090877.2-201ENST00000558441 1738 ntBASIC23.27■■□□□ 1.32
SOD1P00441 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SOD1P00441 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SOD1P00441 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOD1P00441 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SOD1P00441 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOD1P00441 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SOD1P00441 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.26■■□□□ 1.31
SOD1P00441 AC137630.3-201ENST00000607245 391 ntBASIC23.26■■□□□ 1.31
SOD1P00441 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOD1P00441 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SOD1P00441 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SOD1P00441 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SOD1P00441 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOD1P00441 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOD1P00441 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.25■■□□□ 1.31
SOD1P00441 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.25■■□□□ 1.31
SOD1P00441 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SOD1P00441 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.24■■□□□ 1.31
SOD1P00441 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
SOD1P00441 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.24■■□□□ 1.31
SOD1P00441 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.23■■□□□ 1.31
SOD1P00441 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
SOD1P00441 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOD1P00441 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SOD1P00441 AC239859.2-201ENST00000444165 318 ntBASIC23.23■■□□□ 1.31
SOD1P00441 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOD1P00441 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.22■■□□□ 1.31
SOD1P00441 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SOD1P00441 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.22■■□□□ 1.31
SOD1P00441 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.22■■□□□ 1.31
SOD1P00441 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOD1P00441 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SOD1P00441 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 GUSBP5-201ENST00000418136 578 ntBASIC23.21■■□□□ 1.31
SOD1P00441 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SOD1P00441 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOD1P00441 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.2■■□□□ 1.3
SOD1P00441 AF131216.4-201ENST00000638924 1588 ntBASIC23.2■■□□□ 1.3
SOD1P00441 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SOD1P00441 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.2■■□□□ 1.3
SOD1P00441 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOD1P00441 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOD1P00441 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.2■■□□□ 1.3
SOD1P00441 AC021242.3-201ENST00000607598 1377 ntBASIC23.19■■□□□ 1.3
SOD1P00441 BX664725.1-201ENST00000438252 379 ntBASIC23.19■■□□□ 1.3
SOD1P00441 MIR6089-201ENST00000616698 64 ntBASIC23.19■■□□□ 1.3
SOD1P00441 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SOD1P00441 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SOD1P00441 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.18■■□□□ 1.3
SOD1P00441 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.18■■□□□ 1.3
SOD1P00441 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SOD1P00441 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOD1P00441 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOD1P00441 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SOD1P00441 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOD1P00441 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.17■■□□□ 1.3
SOD1P00441 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOD1P00441 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOD1P00441 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOD1P00441 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOD1P00441 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOD1P00441 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms