Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6DO43924 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6DO43924 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6DO43924 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6DO43924 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6DO43924 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6DO43924 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6DO43924 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6DO43924 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
PDE6DO43924 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6DO43924 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6DO43924 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.14■□□□□ 0.5
PDE6DO43924 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6DO43924 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6DO43924 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6DO43924 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6DO43924 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6DO43924 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDE6DO43924 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6DO43924 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6DO43924 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6DO43924 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6DO43924 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6DO43924 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDE6DO43924 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDE6DO43924 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6DO43924 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PDE6DO43924 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6DO43924 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6DO43924 AC233723.2-201ENST00000623798 2106 ntBASIC18.13■□□□□ 0.49
PDE6DO43924 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6DO43924 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6DO43924 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDE6DO43924 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE6DO43924 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE6DO43924 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6DO43924 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDE6DO43924 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6DO43924 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6DO43924 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE6DO43924 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6DO43924 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6DO43924 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDE6DO43924 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6DO43924 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6DO43924 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDE6DO43924 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDE6DO43924 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6DO43924 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
PDE6DO43924 LINC00565-201ENST00000562710 2331 ntBASIC18.11■□□□□ 0.49
PDE6DO43924 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6DO43924 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6DO43924 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.1■□□□□ 0.49
PDE6DO43924 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6DO43924 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6DO43924 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6DO43924 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PDE6DO43924 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6DO43924 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6DO43924 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6DO43924 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PDE6DO43924 AC136428.2-201ENST00000563187 214 ntBASIC18.09■□□□□ 0.49
PDE6DO43924 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDE6DO43924 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6DO43924 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6DO43924 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.08■□□□□ 0.49
PDE6DO43924 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6DO43924 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6DO43924 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6DO43924 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6DO43924 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.08■□□□□ 0.49
PDE6DO43924 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6DO43924 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6DO43924 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6DO43924 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
PDE6DO43924 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDE6DO43924 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDE6DO43924 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6DO43924 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6DO43924 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6DO43924 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PDE6DO43924 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE6DO43924 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms