Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
FOXN1O15353 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.21■■■□□ 2.11
FOXN1O15353 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
FOXN1O15353 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.21■■■□□ 2.11
FOXN1O15353 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.21■■■□□ 2.11
FOXN1O15353 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.21■■■□□ 2.11
FOXN1O15353 AL355001.2-201ENST00000620617 1191 ntBASIC28.21■■■□□ 2.11
FOXN1O15353 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
FOXN1O15353 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
FOXN1O15353 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.2■■■□□ 2.11
FOXN1O15353 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.2■■■□□ 2.11
FOXN1O15353 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.11
FOXN1O15353 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.2■■■□□ 2.1
FOXN1O15353 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
FOXN1O15353 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
FOXN1O15353 EDA-201ENST00000338901 1233 ntBASIC28.19■■■□□ 2.1
FOXN1O15353 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.19■■■□□ 2.1
FOXN1O15353 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.19■■■□□ 2.1
FOXN1O15353 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.19■■■□□ 2.1
FOXN1O15353 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
FOXN1O15353 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
FOXN1O15353 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
FOXN1O15353 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
FOXN1O15353 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.18■■■□□ 2.1
FOXN1O15353 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
FOXN1O15353 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
FOXN1O15353 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
FOXN1O15353 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.17■■■□□ 2.1
FOXN1O15353 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
FOXN1O15353 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
FOXN1O15353 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
FOXN1O15353 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.16■■■□□ 2.1
FOXN1O15353 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.16■■■□□ 2.1
FOXN1O15353 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.16■■■□□ 2.1
FOXN1O15353 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.16■■■□□ 2.1
FOXN1O15353 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
FOXN1O15353 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.16■■■□□ 2.1
FOXN1O15353 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.16■■■□□ 2.1
FOXN1O15353 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.15■■■□□ 2.1
FOXN1O15353 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXN1O15353 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXN1O15353 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
FOXN1O15353 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.15■■■□□ 2.1
FOXN1O15353 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
FOXN1O15353 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
FOXN1O15353 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
FOXN1O15353 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.14■■■□□ 2.1
FOXN1O15353 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
FOXN1O15353 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
FOXN1O15353 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.14■■■□□ 2.1
FOXN1O15353 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
FOXN1O15353 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
FOXN1O15353 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
FOXN1O15353 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
FOXN1O15353 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 AL136967.2-201ENST00000623968 743 ntBASIC28.13■■■□□ 2.09
FOXN1O15353 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
FOXN1O15353 ESRRAP2-201ENST00000418437 1549 ntBASIC28.13■■■□□ 2.09
FOXN1O15353 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.12■■■□□ 2.09
FOXN1O15353 WHAMMP3-201ENST00000611636 1609 ntBASIC28.12■■■□□ 2.09
FOXN1O15353 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
FOXN1O15353 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
FOXN1O15353 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.12■■■□□ 2.09
FOXN1O15353 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
FOXN1O15353 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
FOXN1O15353 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
FOXN1O15353 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.11■■■□□ 2.09
FOXN1O15353 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.11■■■□□ 2.09
FOXN1O15353 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
FOXN1O15353 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
FOXN1O15353 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.1■■■□□ 2.09
FOXN1O15353 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.1■■■□□ 2.09
FOXN1O15353 AC024257.2-201ENST00000549699 147 ntBASIC28.1■■■□□ 2.09
FOXN1O15353 IKBKGP1-201ENST00000612193 1073 ntBASIC28.1■■■□□ 2.09
FOXN1O15353 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
FOXN1O15353 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
FOXN1O15353 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
FOXN1O15353 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
FOXN1O15353 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
FOXN1O15353 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
FOXN1O15353 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.08■■■□□ 2.09
FOXN1O15353 AF213884.3-201ENST00000563833 479 ntBASIC28.08■■■□□ 2.09
FOXN1O15353 MIR4281-201ENST00000580852 62 ntBASIC28.08■■■□□ 2.09
FOXN1O15353 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
FOXN1O15353 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.07■■■□□ 2.08
FOXN1O15353 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.07■■■□□ 2.08
FOXN1O15353 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.07■■■□□ 2.08
FOXN1O15353 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
FOXN1O15353 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.06■■■□□ 2.08
FOXN1O15353 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms