Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.3■■□□□ 1.32
TLR4O00206 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.3■■□□□ 1.32
TLR4O00206 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.3■■□□□ 1.32
TLR4O00206 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TLR4O00206 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.3■■□□□ 1.32
TLR4O00206 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
TLR4O00206 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TLR4O00206 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.29■■□□□ 1.32
TLR4O00206 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
TLR4O00206 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TLR4O00206 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TLR4O00206 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.29■■□□□ 1.32
TLR4O00206 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
TLR4O00206 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.29■■□□□ 1.32
TLR4O00206 MIR6724-1-201ENST00000616420 92 ntBASIC23.29■■□□□ 1.32
TLR4O00206 MIR6724-2-201ENST00000616483 92 ntBASIC23.29■■□□□ 1.32
TLR4O00206 MIR6724-4-201ENST00000617390 92 ntBASIC23.29■■□□□ 1.32
TLR4O00206 MIR6724-3-201ENST00000622482 92 ntBASIC23.29■■□□□ 1.32
TLR4O00206 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TLR4O00206 FOXO3B-201ENST00000395675 1928 ntBASIC23.29■■□□□ 1.32
TLR4O00206 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TLR4O00206 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TLR4O00206 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TLR4O00206 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TLR4O00206 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.28■■□□□ 1.32
TLR4O00206 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.28■■□□□ 1.32
TLR4O00206 AC131281.2-201ENST00000520478 145 ntBASIC23.28■■□□□ 1.32
TLR4O00206 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.28■■□□□ 1.32
TLR4O00206 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.28■■□□□ 1.32
TLR4O00206 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.28■■□□□ 1.32
TLR4O00206 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TLR4O00206 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TLR4O00206 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.27■■□□□ 1.32
TLR4O00206 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TLR4O00206 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.27■■□□□ 1.32
TLR4O00206 AL117332.1-201ENST00000622628 974 ntBASIC23.27■■□□□ 1.32
TLR4O00206 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TLR4O00206 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TLR4O00206 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TLR4O00206 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TLR4O00206 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TLR4O00206 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TLR4O00206 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.26■■□□□ 1.31
TLR4O00206 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.26■■□□□ 1.31
TLR4O00206 MIR3621-201ENST00000580529 85 ntBASIC23.26■■□□□ 1.31
TLR4O00206 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TLR4O00206 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TLR4O00206 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.25■■□□□ 1.31
TLR4O00206 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.25■■□□□ 1.31
TLR4O00206 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TLR4O00206 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.25■■□□□ 1.31
TLR4O00206 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.25■■□□□ 1.31
TLR4O00206 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.25■■□□□ 1.31
TLR4O00206 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TLR4O00206 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TLR4O00206 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 AL356740.2-201ENST00000601559 647 ntBASIC23.24■■□□□ 1.31
TLR4O00206 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.24■■□□□ 1.31
TLR4O00206 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TLR4O00206 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TLR4O00206 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TLR4O00206 AF131216.4-201ENST00000638924 1588 ntBASIC23.23■■□□□ 1.31
TLR4O00206 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TLR4O00206 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.23■■□□□ 1.31
TLR4O00206 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.23■■□□□ 1.31
TLR4O00206 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.23■■□□□ 1.31
TLR4O00206 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TLR4O00206 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TLR4O00206 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TLR4O00206 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TLR4O00206 AL136116.3-201ENST00000402907 1138 ntBASIC23.22■■□□□ 1.31
TLR4O00206 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.22■■□□□ 1.31
TLR4O00206 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TLR4O00206 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TLR4O00206 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.21■■□□□ 1.31
TLR4O00206 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.21■■□□□ 1.31
TLR4O00206 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TLR4O00206 AL139246.5-201ENST00000606645 996 ntBASIC23.21■■□□□ 1.31
TLR4O00206 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.21■■□□□ 1.31
TLR4O00206 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TLR4O00206 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TLR4O00206 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.2■■□□□ 1.3
TLR4O00206 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.2■■□□□ 1.3
TLR4O00206 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR4O00206 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR4O00206 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR4O00206 MIR638-201ENST00000385237 100 ntBASIC23.2■■□□□ 1.3
TLR4O00206 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.2■■□□□ 1.3
TLR4O00206 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR4O00206 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms