Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CGB1A6NKQ9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.7■□□□□ 0.58
CGB1A6NKQ9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CGB1A6NKQ9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB1A6NKQ9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
CGB1A6NKQ9 LINC00543-201ENST00000567234 1845 ntBASIC18.68■□□□□ 0.58
CGB1A6NKQ9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB1A6NKQ9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
CGB1A6NKQ9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CGB1A6NKQ9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 SPCS2P3-201ENST00000500401 656 ntBASIC18.66■□□□□ 0.58
CGB1A6NKQ9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 FOXO3B-201ENST00000395675 1928 ntBASIC18.66■□□□□ 0.58
CGB1A6NKQ9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
CGB1A6NKQ9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 AL592293.1-201ENST00000502889 1188 ntBASIC18.65■□□□□ 0.58
CGB1A6NKQ9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGB1A6NKQ9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CGB1A6NKQ9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CGB1A6NKQ9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 KRT18P10-201ENST00000388836 1287 ntBASIC18.64■□□□□ 0.57
CGB1A6NKQ9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB1A6NKQ9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB1A6NKQ9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms