Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV11-1A0A0K0K1C0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 Z92544.1-202ENST00000571933 1220 ntBASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRBV11-1A0A0K0K1C0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRBV11-1A0A0K0K1C0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 KRT125P-201ENST00000546827 989 ntBASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC090877.2-201ENST00000558441 1738 ntBASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBV11-1A0A0K0K1C0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.75■■□□□ 1.07
TRBV11-1A0A0K0K1C0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV11-1A0A0K0K1C0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TRBV11-1A0A0K0K1C0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.74■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC137630.3-201ENST00000607245 391 ntBASIC21.74■■□□□ 1.07
TRBV11-1A0A0K0K1C0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.74■■□□□ 1.07
TRBV11-1A0A0K0K1C0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 GUSBP5-201ENST00000418136 578 ntBASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV11-1A0A0K0K1C0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.72■■□□□ 1.07
TRBV11-1A0A0K0K1C0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV11-1A0A0K0K1C0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.72■■□□□ 1.07
TRBV11-1A0A0K0K1C0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV11-1A0A0K0K1C0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV11-1A0A0K0K1C0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 MIR4787-201ENST00000607364 84 ntBASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV11-1A0A0K0K1C0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRBV11-1A0A0K0K1C0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.7■■□□□ 1.06
TRBV11-1A0A0K0K1C0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV11-1A0A0K0K1C0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.68■■□□□ 1.06
TRBV11-1A0A0K0K1C0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV11-1A0A0K0K1C0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV11-1A0A0K0K1C0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV11-1A0A0K0K1C0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 AC021242.3-201ENST00000607598 1377 ntBASIC21.67■■□□□ 1.06
TRBV11-1A0A0K0K1C0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms