Protein–RNA interactions for Protein: Q99219

TY3A-I, Transposon Ty3-I Gag polyprotein, yeastyeast

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3A-IQ99219 PHO4YFR034C 939 nt13.89□□□□□ -0.19
TY3A-IQ99219 CCT6YDR188W 1641 nt13.85□□□□□ -0.19
TY3A-IQ99219 YEL076C-AYEL076C-A 651 nt13.81□□□□□ -0.2
TY3A-IQ99219 YEL076CYEL076C 651 nt13.81□□□□□ -0.2
TY3A-IQ99219 YLR464WYLR464W 651 nt13.81□□□□□ -0.2
TY3A-IQ99219 SUF2tP(AGG)C 72 nt13.78□□□□□ -0.2
TY3A-IQ99219 SUF10tP(AGG)N 72 nt13.78□□□□□ -0.2
TY3A-IQ99219 UBX6YJL048C 1191 nt13.78□□□□□ -0.2
TY3A-IQ99219 YJL152WYJL152W 360 nt13.76□□□□□ -0.21
TY3A-IQ99219 LPX1YOR084W 1164 nt13.75□□□□□ -0.21
TY3A-IQ99219 ALF1YNL148C 765 nt13.73□□□□□ -0.21
TY3A-IQ99219 ERV46YAL042W 1248 nt13.72□□□□□ -0.21
TY3A-IQ99219 IDH1YNL037C 1083 nt13.71□□□□□ -0.21
TY3A-IQ99219 SPP1YPL138C 1062 nt13.69□□□□□ -0.22
TY3A-IQ99219 SIS1YNL007C 1059 nt13.67□□□□□ -0.22
TY3A-IQ99219 RTG1YOL067C 534 nt13.65□□□□□ -0.22
TY3A-IQ99219 YDR433WYDR433W 441 nt13.64□□□□□ -0.23
TY3A-IQ99219 YKR040CYKR040C 504 nt13.58□□□□□ -0.24
TY3A-IQ99219 HUA1YGR268C 597 nt13.51□□□□□ -0.25
TY3A-IQ99219 GBP2YCL011C 1284 nt13.49□□□□□ -0.25
TY3A-IQ99219 YDR094WYDR094W 336 nt13.44□□□□□ -0.26
TY3A-IQ99219 YDR095CYDR095C 411 nt13.4□□□□□ -0.26
TY3A-IQ99219 MXR2YCL033C 507 nt13.39□□□□□ -0.27
TY3A-IQ99219 YPS1YLR120C 1710 nt13.38□□□□□ -0.27
TY3A-IQ99219 TIR4YOR009W 1464 nt13.35□□□□□ -0.27
TY3A-IQ99219 YFL015W-AYFL015W-A 318 nt13.29□□□□□ -0.28
TY3A-IQ99219 YHR165W-AYHR165W-A 312 nt13.28□□□□□ -0.28
TY3A-IQ99219 YCL048W-AYCL048W-A 240 nt13.27□□□□□ -0.29
TY3A-IQ99219 TCD2YKL027W 1344 nt13.26□□□□□ -0.29
TY3A-IQ99219 CAC2YML102W 1407 nt13.26□□□□□ -0.29
TY3A-IQ99219 RPP2AYOL039W 321 nt13.19□□□□□ -0.3
TY3A-IQ99219 YMR057CYMR057C 372 nt13.17□□□□□ -0.3
TY3A-IQ99219 PET9YBL030C 957 nt13.14□□□□□ -0.31
TY3A-IQ99219 ART5YGR068C 1761 nt13.13□□□□□ -0.31
TY3A-IQ99219 YKL030WYKL030W 606 nt13.1□□□□□ -0.31
TY3A-IQ99219 FRD1YEL047C 1413 nt13.09□□□□□ -0.31
TY3A-IQ99219 PTH1YHR189W 573 nt13.08□□□□□ -0.32
TY3A-IQ99219 YLR235CYLR235C 399 nt13.07□□□□□ -0.32
TY3A-IQ99219 YCL042WYCL042W 360 nt13.05□□□□□ -0.32
TY3A-IQ99219 GFD2YCL036W 1701 nt12.99□□□□□ -0.33
TY3A-IQ99219 DED1YOR204W 1815 nt12.99□□□□□ -0.33
TY3A-IQ99219 PTP1YDL230W 1008 nt12.98□□□□□ -0.33
TY3A-IQ99219 LCB1YMR296C 1677 nt12.94□□□□□ -0.34
TY3A-IQ99219 RRD1YIL153W 1182 nt12.94□□□□□ -0.34
TY3A-IQ99219 SBA1YKL117W 651 nt12.94□□□□□ -0.34
TY3A-IQ99219 PAU16YKL224C 372 nt12.91□□□□□ -0.34
TY3A-IQ99219 SPT5YML010W 3192 nt12.9□□□□□ -0.34
TY3A-IQ99219 SOR2YDL246C 1074 nt12.89□□□□□ -0.35
TY3A-IQ99219 RRT5YFR032C 870 nt12.89□□□□□ -0.35
TY3A-IQ99219 SOR1YJR159W 1074 nt12.89□□□□□ -0.35
TY3A-IQ99219 MEP2YNL142W 1500 nt12.84□□□□□ -0.35
TY3A-IQ99219 FPS1YLL043W 2010 nt12.84□□□□□ -0.35
TY3A-IQ99219 YFR018CYFR018C 1092 nt12.83□□□□□ -0.36
TY3A-IQ99219 tL(GAG)GtL(GAG)G 82 nt12.82□□□□□ -0.36
TY3A-IQ99219 FMT1YBL013W 1206 nt12.81□□□□□ -0.36
TY3A-IQ99219 SSA4YER103W 1929 nt12.79□□□□□ -0.36
TY3A-IQ99219 RTS2YOR077W 699 nt12.78□□□□□ -0.36
TY3A-IQ99219 FMP52YER004W 696 nt12.75□□□□□ -0.37
TY3A-IQ99219 TIM23YNR017W 669 nt12.73□□□□□ -0.37
TY3A-IQ99219 CWP1YKL096W 720 nt12.72□□□□□ -0.37
TY3A-IQ99219 PRE6YOL038W 765 nt12.69□□□□□ -0.38
TY3A-IQ99219 DIC1YLR348C 897 nt12.67□□□□□ -0.38
TY3A-IQ99219 CUE1YMR264W 612 nt12.67□□□□□ -0.38
TY3A-IQ99219 SNF6YHL025W 999 nt12.65□□□□□ -0.38
TY3A-IQ99219 YPR064WYPR064W 420 nt12.65□□□□□ -0.38
TY3A-IQ99219 YLR179CYLR179C 606 nt12.64□□□□□ -0.39
TY3A-IQ99219 ADH2YMR303C 1047 nt12.63□□□□□ -0.39
TY3A-IQ99219 DCW1YKL046C 1350 nt12.63□□□□□ -0.39
TY3A-IQ99219 YIL100WYIL100W 354 nt12.59□□□□□ -0.39
TY3A-IQ99219 TAD3YLR316C 969 nt12.57□□□□□ -0.4
TY3A-IQ99219 IRC15YPL017C 1500 nt12.57□□□□□ -0.4
TY3A-IQ99219 NAT4YMR069W 858 nt12.56□□□□□ -0.4
TY3A-IQ99219 EMI2YDR516C 1503 nt12.56□□□□□ -0.4
TY3A-IQ99219 YDL221WYDL221W 552 nt12.51□□□□□ -0.41
TY3A-IQ99219 YMR090WYMR090W 684 nt12.5□□□□□ -0.41
TY3A-IQ99219 GIS3YLR094C 1509 nt12.47□□□□□ -0.41
TY3A-IQ99219 GLK1YCL040W 1503 nt12.47□□□□□ -0.41
TY3A-IQ99219 YFL066CYFL066C 1179 nt12.46□□□□□ -0.41
TY3A-IQ99219 PCM1YEL058W 1674 nt12.45□□□□□ -0.42
TY3A-IQ99219 PEX25YPL112C 1185 nt12.45□□□□□ -0.42
TY3A-IQ99219 RNQ1YCL028W 1218 nt12.45□□□□□ -0.42
TY3A-IQ99219 AHT1YHR093W 549 nt12.44□□□□□ -0.42
TY3A-IQ99219 WSC2YNL283C 1512 nt12.43□□□□□ -0.42
TY3A-IQ99219 YIH1YCR059C 777 nt12.39□□□□□ -0.43
TY3A-IQ99219 BDF1YLR399C 2061 nt12.35□□□□□ -0.43
TY3A-IQ99219 MSF1YPR047W 1410 nt12.35□□□□□ -0.43
TY3A-IQ99219 AQY1YPR192W 918 nt12.32□□□□□ -0.44
TY3A-IQ99219 YNL115CYNL115C 1935 nt12.31□□□□□ -0.44
TY3A-IQ99219 YLR415CYLR415C 339 nt12.3□□□□□ -0.44
TY3A-IQ99219 YSP3YOR003W 1437 nt12.28□□□□□ -0.44
TY3A-IQ99219 THI74YDR438W 1113 nt12.28□□□□□ -0.44
TY3A-IQ99219 SCC4YER147C 1875 nt12.27□□□□□ -0.45
TY3A-IQ99219 YSC84YHR016C 1407 nt12.27□□□□□ -0.45
TY3A-IQ99219 BDH1YAL060W 1149 nt12.26□□□□□ -0.45
TY3A-IQ99219 YMR244WYMR244W 1068 nt12.26□□□□□ -0.45
TY3A-IQ99219 YLL053CYLL053C 459 nt12.24□□□□□ -0.45
TY3A-IQ99219 YNL195CYNL195C 786 nt12.23□□□□□ -0.45
TY3A-IQ99219 SDH1YKL148C 1923 nt12.21□□□□□ -0.45
TY3A-IQ99219 MIR1YJR077C 936 nt12.21□□□□□ -0.45
TY3A-IQ99219 FTR1YER145C 1215 nt12.2□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 1003.6 ms