Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 SUF2tP(AGG)C 72 nt14.53□□□□□ -0.08
PRP42Q03776 SUF10tP(AGG)N 72 nt14.53□□□□□ -0.08
PRP42Q03776 MRPL8YJL063C 717 nt14.52□□□□□ -0.09
PRP42Q03776 ALF1YNL148C 765 nt14.52□□□□□ -0.09
PRP42Q03776 YJL152WYJL152W 360 nt14.48□□□□□ -0.09
PRP42Q03776 LPX1YOR084W 1164 nt14.41□□□□□ -0.1
PRP42Q03776 ERV46YAL042W 1248 nt14.36□□□□□ -0.11
PRP42Q03776 IDH1YNL037C 1083 nt14.35□□□□□ -0.11
PRP42Q03776 SPP1YPL138C 1062 nt14.35□□□□□ -0.11
PRP42Q03776 YPS1YLR120C 1710 nt14.35□□□□□ -0.11
PRP42Q03776 ADO1YJR105W 1023 nt14.33□□□□□ -0.12
PRP42Q03776 YDR095CYDR095C 411 nt14.32□□□□□ -0.12
PRP42Q03776 SPT5YML010W 3192 nt14.31□□□□□ -0.12
PRP42Q03776 YDR433WYDR433W 441 nt14.29□□□□□ -0.12
PRP42Q03776 YEL076C-AYEL076C-A 651 nt14.28□□□□□ -0.12
PRP42Q03776 YEL076CYEL076C 651 nt14.28□□□□□ -0.12
PRP42Q03776 YLR464WYLR464W 651 nt14.28□□□□□ -0.12
PRP42Q03776 SIS1YNL007C 1059 nt14.27□□□□□ -0.13
PRP42Q03776 YKR040CYKR040C 504 nt14.22□□□□□ -0.13
PRP42Q03776 RTG1YOL067C 534 nt14.21□□□□□ -0.13
PRP42Q03776 TIR4YOR009W 1464 nt14.2□□□□□ -0.14
PRP42Q03776 UBX6YJL048C 1191 nt14.19□□□□□ -0.14
PRP42Q03776 YHR165W-AYHR165W-A 312 nt14.18□□□□□ -0.14
PRP42Q03776 GBP2YCL011C 1284 nt14.18□□□□□ -0.14
PRP42Q03776 MXR2YCL033C 507 nt14.12□□□□□ -0.15
PRP42Q03776 RPP2AYOL039W 321 nt14.08□□□□□ -0.16
PRP42Q03776 CAC2YML102W 1407 nt14.05□□□□□ -0.16
PRP42Q03776 ART5YGR068C 1761 nt14.03□□□□□ -0.16
PRP42Q03776 YMR057CYMR057C 372 nt14.01□□□□□ -0.17
PRP42Q03776 YCL048W-AYCL048W-A 240 nt13.99□□□□□ -0.17
PRP42Q03776 HUA1YGR268C 597 nt13.97□□□□□ -0.17
PRP42Q03776 PET9YBL030C 957 nt13.97□□□□□ -0.17
PRP42Q03776 PTP1YDL230W 1008 nt13.95□□□□□ -0.18
PRP42Q03776 MEP2YNL142W 1500 nt13.95□□□□□ -0.18
PRP42Q03776 TCD2YKL027W 1344 nt13.94□□□□□ -0.18
PRP42Q03776 GFD2YCL036W 1701 nt13.89□□□□□ -0.19
PRP42Q03776 YDR094WYDR094W 336 nt13.85□□□□□ -0.19
PRP42Q03776 FRD1YEL047C 1413 nt13.81□□□□□ -0.2
PRP42Q03776 DED1YOR204W 1815 nt13.8□□□□□ -0.2
PRP42Q03776 DCW1YKL046C 1350 nt13.8□□□□□ -0.2
PRP42Q03776 SSA4YER103W 1929 nt13.75□□□□□ -0.21
PRP42Q03776 RRD1YIL153W 1182 nt13.75□□□□□ -0.21
PRP42Q03776 PTH1YHR189W 573 nt13.74□□□□□ -0.21
PRP42Q03776 FPS1YLL043W 2010 nt13.72□□□□□ -0.21
PRP42Q03776 YFL015W-AYFL015W-A 318 nt13.7□□□□□ -0.22
PRP42Q03776 YCL042WYCL042W 360 nt13.7□□□□□ -0.22
PRP42Q03776 YKL030WYKL030W 606 nt13.68□□□□□ -0.22
PRP42Q03776 RTS2YOR077W 699 nt13.68□□□□□ -0.22
PRP42Q03776 YLR235CYLR235C 399 nt13.65□□□□□ -0.22
PRP42Q03776 FMT1YBL013W 1206 nt13.64□□□□□ -0.23
PRP42Q03776 SOR2YDL246C 1074 nt13.6□□□□□ -0.23
PRP42Q03776 SOR1YJR159W 1074 nt13.6□□□□□ -0.23
PRP42Q03776 LCB1YMR296C 1677 nt13.58□□□□□ -0.24
PRP42Q03776 EMI2YDR516C 1503 nt13.55□□□□□ -0.24
PRP42Q03776 IRC15YPL017C 1500 nt13.54□□□□□ -0.24
PRP42Q03776 CUE1YMR264W 612 nt13.54□□□□□ -0.24
PRP42Q03776 YDL221WYDL221W 552 nt13.47□□□□□ -0.25
PRP42Q03776 CWP1YKL096W 720 nt13.47□□□□□ -0.25
PRP42Q03776 FMP52YER004W 696 nt13.46□□□□□ -0.25
PRP42Q03776 GIS3YLR094C 1509 nt13.43□□□□□ -0.26
PRP42Q03776 ADH2YMR303C 1047 nt13.41□□□□□ -0.26
PRP42Q03776 YMR090WYMR090W 684 nt13.4□□□□□ -0.26
PRP42Q03776 YIL100WYIL100W 354 nt13.39□□□□□ -0.27
PRP42Q03776 PAU16YKL224C 372 nt13.38□□□□□ -0.27
PRP42Q03776 TIM23YNR017W 669 nt13.37□□□□□ -0.27
PRP42Q03776 YFR018CYFR018C 1092 nt13.35□□□□□ -0.27
PRP42Q03776 tL(GAG)GtL(GAG)G 82 nt13.35□□□□□ -0.27
PRP42Q03776 YBR220CYBR220C 1683 nt13.34□□□□□ -0.27
PRP42Q03776 SBA1YKL117W 651 nt13.32□□□□□ -0.28
PRP42Q03776 DIC1YLR348C 897 nt13.32□□□□□ -0.28
PRP42Q03776 RRT5YFR032C 870 nt13.31□□□□□ -0.28
PRP42Q03776 SDH1YKL148C 1923 nt13.3□□□□□ -0.28
PRP42Q03776 YLR179CYLR179C 606 nt13.28□□□□□ -0.28
PRP42Q03776 PRE6YOL038W 765 nt13.27□□□□□ -0.29
PRP42Q03776 PCM1YEL058W 1674 nt13.26□□□□□ -0.29
PRP42Q03776 SNF6YHL025W 999 nt13.26□□□□□ -0.29
PRP42Q03776 YPR064WYPR064W 420 nt13.25□□□□□ -0.29
PRP42Q03776 BDF1YLR399C 2061 nt13.25□□□□□ -0.29
PRP42Q03776 SCC4YER147C 1875 nt13.23□□□□□ -0.29
PRP42Q03776 TAD3YLR316C 969 nt13.18□□□□□ -0.3
PRP42Q03776 RNQ1YCL028W 1218 nt13.18□□□□□ -0.3
PRP42Q03776 WSC2YNL283C 1512 nt13.13□□□□□ -0.31
PRP42Q03776 YIH1YCR059C 777 nt13.13□□□□□ -0.31
PRP42Q03776 AHT1YHR093W 549 nt13.12□□□□□ -0.31
PRP42Q03776 YFL066CYFL066C 1179 nt13.09□□□□□ -0.31
PRP42Q03776 TAT1YBR069C 1860 nt13.06□□□□□ -0.32
PRP42Q03776 YNL195CYNL195C 786 nt13.04□□□□□ -0.32
PRP42Q03776 PEX25YPL112C 1185 nt13.01□□□□□ -0.33
PRP42Q03776 YLL053CYLL053C 459 nt13□□□□□ -0.33
PRP42Q03776 NAT4YMR069W 858 nt12.97□□□□□ -0.33
PRP42Q03776 YSC84YHR016C 1407 nt12.96□□□□□ -0.34
PRP42Q03776 AQY1YPR192W 918 nt12.95□□□□□ -0.34
PRP42Q03776 FTR1YER145C 1215 nt12.94□□□□□ -0.34
PRP42Q03776 RRT12YCR045C 1476 nt12.93□□□□□ -0.34
PRP42Q03776 BDH1YAL060W 1149 nt12.93□□□□□ -0.34
PRP42Q03776 BIO4YNR057C 714 nt12.93□□□□□ -0.34
PRP42Q03776 YSP3YOR003W 1437 nt12.93□□□□□ -0.34
PRP42Q03776 YNL115CYNL115C 1935 nt12.92□□□□□ -0.34
PRP42Q03776 GAL1YBR020W 1587 nt12.91□□□□□ -0.34
PRP42Q03776 SIM1YIL123W 1431 nt12.89□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 9.4 ms