Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 SIS1YNL007C 1059 nt13.26□□□□□ -0.29 RIP-Chip
SCD6P45978 MEP2YNL142W 1500 nt13.22□□□□□ -0.29 RIP-Chip
SCD6P45978 RPP2AYOL039W 321 nt13.19□□□□□ -0.3
SCD6P45978 IMP2'YIL154C 1041 nt13.18□□□□□ -0.3
SCD6P45978 DSK2YMR276W 1122 nt13.15□□□□□ -0.3
SCD6P45978 YJL152WYJL152W 360 nt13.13□□□□□ -0.31
SCD6P45978 PTP1YDL230W 1008 nt13.09□□□□□ -0.31 RIP-Chip
SCD6P45978 YLR236CYLR236C 324 nt13.06□□□□□ -0.32
SCD6P45978 YPR011CYPR011C 981 nt13.06□□□□□ -0.32
SCD6P45978 TIR4YOR009W 1464 nt13.05□□□□□ -0.32
SCD6P45978 FMP45YDL222C 930 nt13.03□□□□□ -0.32
SCD6P45978 YCH1YGR203W 447 nt13.03□□□□□ -0.32
SCD6P45978 MOT3YMR070W 1473 nt13.02□□□□□ -0.33 RIP-Chip
SCD6P45978 ART5YGR068C 1761 nt13□□□□□ -0.33
SCD6P45978 DCW1YKL046C 1350 nt12.99□□□□□ -0.33
SCD6P45978 PET9YBL030C 957 nt12.99□□□□□ -0.33
SCD6P45978 IDH1YNL037C 1083 nt12.98□□□□□ -0.33 RIP-Chip
SCD6P45978 GFD2YCL036W 1701 nt12.94□□□□□ -0.34 RIP-Chip
SCD6P45978 CAC2YML102W 1407 nt12.94□□□□□ -0.34
SCD6P45978 YMR057CYMR057C 372 nt12.9□□□□□ -0.34
SCD6P45978 ERV46YAL042W 1248 nt12.87□□□□□ -0.35
SCD6P45978 EMI2YDR516C 1503 nt12.87□□□□□ -0.35
SCD6P45978 LPX1YOR084W 1164 nt12.84□□□□□ -0.35
SCD6P45978 YCL048W-AYCL048W-A 240 nt12.84□□□□□ -0.35
SCD6P45978 GBP2YCL011C 1284 nt12.83□□□□□ -0.36 RIP-Chip
SCD6P45978 YDR433WYDR433W 441 nt12.81□□□□□ -0.36
SCD6P45978 YMR090WYMR090W 684 nt12.8□□□□□ -0.36 RIP-Chip
SCD6P45978 YDL221WYDL221W 552 nt12.79□□□□□ -0.36
SCD6P45978 YKR040CYKR040C 504 nt12.75□□□□□ -0.37
SCD6P45978 IRC15YPL017C 1500 nt12.74□□□□□ -0.37
SCD6P45978 RTS2YOR077W 699 nt12.74□□□□□ -0.37
SCD6P45978 SSA4YER103W 1929 nt12.72□□□□□ -0.37
SCD6P45978 FPS1YLL043W 2010 nt12.71□□□□□ -0.38
SCD6P45978 TCD2YKL027W 1344 nt12.69□□□□□ -0.38 RIP-Chip
SCD6P45978 CUE1YMR264W 612 nt12.68□□□□□ -0.38 RIP-Chip
SCD6P45978 MXR2YCL033C 507 nt12.68□□□□□ -0.38
SCD6P45978 GIS3YLR094C 1509 nt12.64□□□□□ -0.39
SCD6P45978 SPP1YPL138C 1062 nt12.62□□□□□ -0.39
SCD6P45978 MRPL8YJL063C 717 nt12.61□□□□□ -0.39 RIP-Chip
SCD6P45978 SDH1YKL148C 1923 nt12.59□□□□□ -0.39
SCD6P45978 RRD1YIL153W 1182 nt12.59□□□□□ -0.39
SCD6P45978 DED1YOR204W 1815 nt12.57□□□□□ -0.4
SCD6P45978 SCC4YER147C 1875 nt12.55□□□□□ -0.4
SCD6P45978 YBR220CYBR220C 1683 nt12.54□□□□□ -0.4
SCD6P45978 YIL100WYIL100W 354 nt12.53□□□□□ -0.4
SCD6P45978 FRD1YEL047C 1413 nt12.47□□□□□ -0.41
SCD6P45978 RTG1YOL067C 534 nt12.47□□□□□ -0.41
SCD6P45978 ADO1YJR105W 1023 nt12.46□□□□□ -0.41
SCD6P45978 YEL076C-AYEL076C-A 651 nt12.45□□□□□ -0.42
SCD6P45978 YEL076CYEL076C 651 nt12.45□□□□□ -0.42
SCD6P45978 FMP52YER004W 696 nt12.45□□□□□ -0.42
SCD6P45978 YLR464WYLR464W 651 nt12.45□□□□□ -0.42 RIP-Chip
SCD6P45978 FMT1YBL013W 1206 nt12.44□□□□□ -0.42
SCD6P45978 YCL042WYCL042W 360 nt12.44□□□□□ -0.42
SCD6P45978 SOR2YDL246C 1074 nt12.43□□□□□ -0.42
SCD6P45978 SOR1YJR159W 1074 nt12.43□□□□□ -0.42
SCD6P45978 CWP1YKL096W 720 nt12.32□□□□□ -0.44
SCD6P45978 YNL195CYNL195C 786 nt12.31□□□□□ -0.44
SCD6P45978 YLR235CYLR235C 399 nt12.29□□□□□ -0.44
SCD6P45978 ADH2YMR303C 1047 nt12.28□□□□□ -0.44 RIP-Chip
SCD6P45978 HUA1YGR268C 597 nt12.27□□□□□ -0.45
SCD6P45978 PTH1YHR189W 573 nt12.27□□□□□ -0.45
SCD6P45978 YKL030WYKL030W 606 nt12.24□□□□□ -0.45
SCD6P45978 PCM1YEL058W 1674 nt12.23□□□□□ -0.45
SCD6P45978 SNF6YHL025W 999 nt12.2□□□□□ -0.46
SCD6P45978 YSC84YHR016C 1407 nt12.2□□□□□ -0.46 RIP-Chip
SCD6P45978 RRT12YCR045C 1476 nt12.19□□□□□ -0.46
SCD6P45978 BDF1YLR399C 2061 nt12.18□□□□□ -0.46 RIP-Chip
SCD6P45978 LCB1YMR296C 1677 nt12.14□□□□□ -0.47
SCD6P45978 DIC1YLR348C 897 nt12.13□□□□□ -0.47 RIP-Chip
SCD6P45978 YHL050CYHL050C 2094 nt12.13□□□□□ -0.47
SCD6P45978 SEC11YIR022W 504 nt12.12□□□□□ -0.47
SCD6P45978 RNQ1YCL028W 1218 nt12.11□□□□□ -0.47
SCD6P45978 YIH1YCR059C 777 nt12.1□□□□□ -0.47
SCD6P45978 TIM23YNR017W 669 nt12.1□□□□□ -0.47
SCD6P45978 UBX6YJL048C 1191 nt12.06□□□□□ -0.48
SCD6P45978 TAT1YBR069C 1860 nt12.05□□□□□ -0.48 RIP-Chip
SCD6P45978 YDR094WYDR094W 336 nt12.01□□□□□ -0.49
SCD6P45978 YLR179CYLR179C 606 nt12.01□□□□□ -0.49 RIP-Chip
SCD6P45978 BIO4YNR057C 714 nt12□□□□□ -0.49 RIP-Chip
SCD6P45978 SIM1YIL123W 1431 nt12□□□□□ -0.49
SCD6P45978 PCH2YBR186W 1695 nt11.97□□□□□ -0.49
SCD6P45978 YLL053CYLL053C 459 nt11.96□□□□□ -0.49
SCD6P45978 YPR064WYPR064W 420 nt11.95□□□□□ -0.5
SCD6P45978 tL(GAG)GtL(GAG)G 82 nt11.94□□□□□ -0.5
SCD6P45978 FTR1YER145C 1215 nt11.91□□□□□ -0.5
SCD6P45978 AHT1YHR093W 549 nt11.91□□□□□ -0.5
SCD6P45978 AQY1YPR192W 918 nt11.91□□□□□ -0.5
SCD6P45978 WSC2YNL283C 1512 nt11.9□□□□□ -0.5
SCD6P45978 TAD3YLR316C 969 nt11.88□□□□□ -0.51 RIP-Chip
SCD6P45978 GUT2YIL155C 1950 nt11.88□□□□□ -0.51 RIP-Chip
SCD6P45978 GAL1YBR020W 1587 nt11.86□□□□□ -0.51
SCD6P45978 ERF2YLR246W 1080 nt11.83□□□□□ -0.52 RIP-Chip
SCD6P45978 TRM5YHR070W 1500 nt11.81□□□□□ -0.52
SCD6P45978 NCP1YHR042W 2076 nt11.8□□□□□ -0.52 RIP-Chip
SCD6P45978 YFR018CYFR018C 1092 nt11.79□□□□□ -0.52
SCD6P45978 BOP3YNL042W 1191 nt11.79□□□□□ -0.52
SCD6P45978 YFL067WYFL067W 528 nt11.78□□□□□ -0.52
SCD6P45978 ATF2YGR177C 1608 nt11.76□□□□□ -0.53
SCD6P45978 SPC25YER018C 666 nt11.76□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms