Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YCH1YGR203W 447 nt10.46□□□□□ -0.73
LSM4P40070 UBX6YJL048C 1191 nt10.46□□□□□ -0.73
LSM4P40070 DSK2YMR276W 1122 nt10.45□□□□□ -0.74
LSM4P40070 UME6YDR207C 2511 nt10.45□□□□□ -0.74
LSM4P40070 EMI2YDR516C 1503 nt10.44□□□□□ -0.74
LSM4P40070 ADO1YJR105W 1023 nt10.44□□□□□ -0.74
LSM4P40070 SEC11YIR022W 504 nt10.43□□□□□ -0.74
LSM4P40070 IMP2'YIL154C 1041 nt10.42□□□□□ -0.74
LSM4P40070 FIS1YIL065C 468 nt10.41□□□□□ -0.74
LSM4P40070 YLR236CYLR236C 324 nt10.41□□□□□ -0.74
LSM4P40070 YJL225CYJL225C 5277 nt10.38□□□□□ -0.75
LSM4P40070 YEL076C-AYEL076C-A 651 nt10.36□□□□□ -0.75
LSM4P40070 YEL076CYEL076C 651 nt10.36□□□□□ -0.75
LSM4P40070 YLR464WYLR464W 651 nt10.36□□□□□ -0.75
LSM4P40070 SDH1YKL148C 1923 nt10.35□□□□□ -0.75
LSM4P40070 YPS1YLR120C 1710 nt10.33□□□□□ -0.76
LSM4P40070 DAL1YIR027C 1383 nt10.33□□□□□ -0.76
LSM4P40070 RTG1YOL067C 534 nt10.31□□□□□ -0.76
LSM4P40070 YDL221WYDL221W 552 nt10.28□□□□□ -0.76
LSM4P40070 INM2YDR287W 879 nt10.28□□□□□ -0.76
LSM4P40070 YHR165W-AYHR165W-A 312 nt10.26□□□□□ -0.77
LSM4P40070 FPR4YLR449W 1179 nt10.26□□□□□ -0.77
LSM4P40070 PIB2YGL023C 1908 nt10.26□□□□□ -0.77
LSM4P40070 BOR1YNL275W 1731 nt10.26□□□□□ -0.77
LSM4P40070 YLR154C-GYLR154C-G 150 nt10.25□□□□□ -0.77
LSM4P40070 SIS1YNL007C 1059 nt10.25□□□□□ -0.77
LSM4P40070 PHO4YFR034C 939 nt10.24□□□□□ -0.77
LSM4P40070 ERV46YAL042W 1248 nt10.23□□□□□ -0.77
LSM4P40070 YBL100CYBL100C 315 nt10.22□□□□□ -0.77
LSM4P40070 TRM9YML014W 840 nt10.2□□□□□ -0.78
LSM4P40070 SPP1YPL138C 1062 nt10.2□□□□□ -0.78
LSM4P40070 YFL015W-AYFL015W-A 318 nt10.18□□□□□ -0.78
LSM4P40070 LPX1YOR084W 1164 nt10.18□□□□□ -0.78
LSM4P40070 YDR094WYDR094W 336 nt10.15□□□□□ -0.78
LSM4P40070 YDR095CYDR095C 411 nt10.15□□□□□ -0.78
LSM4P40070 FUN26YAL022C 1554 nt10.14□□□□□ -0.79
LSM4P40070 RTF1YGL244W 1677 nt10.14□□□□□ -0.79
LSM4P40070 CCT6YDR188W 1641 nt10.14□□□□□ -0.79
LSM4P40070 SCC4YER147C 1875 nt10.13□□□□□ -0.79
LSM4P40070 MCH5YOR306C 1566 nt10.05□□□□□ -0.8
LSM4P40070 CAC2YML102W 1407 nt10.05□□□□□ -0.8
LSM4P40070 YKR040CYKR040C 504 nt10.04□□□□□ -0.8
LSM4P40070 YSC84YHR016C 1407 nt10.02□□□□□ -0.81
LSM4P40070 HUA1YGR268C 597 nt10.01□□□□□ -0.81
LSM4P40070 PTP1YDL230W 1008 nt9.99□□□□□ -0.81
LSM4P40070 IDH1YNL037C 1083 nt9.99□□□□□ -0.81
LSM4P40070 BOP3YNL042W 1191 nt9.99□□□□□ -0.81
LSM4P40070 PTK1YKL198C 1989 nt9.97□□□□□ -0.81
LSM4P40070 SUF2tP(AGG)C 72 nt9.95□□□□□ -0.82
LSM4P40070 SUF10tP(AGG)N 72 nt9.95□□□□□ -0.82
LSM4P40070 YDR433WYDR433W 441 nt9.94□□□□□ -0.82
LSM4P40070 RPP2AYOL039W 321 nt9.94□□□□□ -0.82
LSM4P40070 YJL152WYJL152W 360 nt9.92□□□□□ -0.82
LSM4P40070 IRC15YPL017C 1500 nt9.92□□□□□ -0.82
LSM4P40070 YHL050CYHL050C 2094 nt9.91□□□□□ -0.82
LSM4P40070 SBA1YKL117W 651 nt9.87□□□□□ -0.83
LSM4P40070 GIS3YLR094C 1509 nt9.87□□□□□ -0.83
LSM4P40070 ALG12YNR030W 1656 nt9.87□□□□□ -0.83
LSM4P40070 RDN37-1RDN37-1 5354 nt9.85□□□□□ -0.83
LSM4P40070 RDN37-2RDN37-2 5354 nt9.85□□□□□ -0.83
LSM4P40070 MXR2YCL033C 507 nt9.84□□□□□ -0.83
LSM4P40070 GBP2YCL011C 1284 nt9.83□□□□□ -0.84
LSM4P40070 ALF1YNL148C 765 nt9.82□□□□□ -0.84
LSM4P40070 Q0182Q0182 405 nt9.81□□□□□ -0.84
LSM4P40070 TIR4YOR009W 1464 nt9.75□□□□□ -0.85
LSM4P40070 HSP60YLR259C 1719 nt9.74□□□□□ -0.85
LSM4P40070 YFL054CYFL054C 1941 nt9.74□□□□□ -0.85
LSM4P40070 SPT8YLR055C 1809 nt9.72□□□□□ -0.85
LSM4P40070 RRT12YCR045C 1476 nt9.72□□□□□ -0.85
LSM4P40070 FRD1YEL047C 1413 nt9.71□□□□□ -0.86
LSM4P40070 YKL030WYKL030W 606 nt9.66□□□□□ -0.86
LSM4P40070 PAU16YKL224C 372 nt9.66□□□□□ -0.86
LSM4P40070 YLR235CYLR235C 399 nt9.65□□□□□ -0.86
LSM4P40070 TCD2YKL027W 1344 nt9.64□□□□□ -0.87
LSM4P40070 YFR018CYFR018C 1092 nt9.64□□□□□ -0.87
LSM4P40070 YNL195CYNL195C 786 nt9.64□□□□□ -0.87
LSM4P40070 GFD2YCL036W 1701 nt9.62□□□□□ -0.87
LSM4P40070 DED1YOR204W 1815 nt9.62□□□□□ -0.87
LSM4P40070 RTS2YOR077W 699 nt9.61□□□□□ -0.87
LSM4P40070 NCP1YHR042W 2076 nt9.59□□□□□ -0.87
LSM4P40070 PTH1YHR189W 573 nt9.57□□□□□ -0.88
LSM4P40070 NAR1YNL240C 1476 nt9.57□□□□□ -0.88
LSM4P40070 ART5YGR068C 1761 nt9.57□□□□□ -0.88
LSM4P40070 PET9YBL030C 957 nt9.56□□□□□ -0.88
LSM4P40070 YCL048W-AYCL048W-A 240 nt9.56□□□□□ -0.88
LSM4P40070 LCB1YMR296C 1677 nt9.55□□□□□ -0.88
LSM4P40070 CUE1YMR264W 612 nt9.55□□□□□ -0.88
LSM4P40070 SOR2YDL246C 1074 nt9.54□□□□□ -0.88
LSM4P40070 RRT5YFR032C 870 nt9.54□□□□□ -0.88
LSM4P40070 RRD1YIL153W 1182 nt9.54□□□□□ -0.88
LSM4P40070 SOR1YJR159W 1074 nt9.54□□□□□ -0.88
LSM4P40070 YMR057CYMR057C 372 nt9.54□□□□□ -0.88
LSM4P40070 GLK1YCL040W 1503 nt9.54□□□□□ -0.88
LSM4P40070 PRE6YOL038W 765 nt9.51□□□□□ -0.89
LSM4P40070 FMT1YBL013W 1206 nt9.48□□□□□ -0.89
LSM4P40070 tL(GAG)GtL(GAG)G 82 nt9.47□□□□□ -0.89
LSM4P40070 SWE1YJL187C 2460 nt9.46□□□□□ -0.89
LSM4P40070 YCL042WYCL042W 360 nt9.46□□□□□ -0.9
LSM4P40070 YIL100WYIL100W 354 nt9.43□□□□□ -0.9
LSM4P40070 SNF6YHL025W 999 nt9.41□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms