Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 MOT3YMR070W 1473 nt12.96□□□□□ -0.34
VPS3P23643 YHR165W-AYHR165W-A 312 nt12.95□□□□□ -0.34
VPS3P23643 SPT5YML010W 3192 nt12.95□□□□□ -0.34
VPS3P23643 SIS1YNL007C 1059 nt12.93□□□□□ -0.34
VPS3P23643 FMP45YDL222C 930 nt12.92□□□□□ -0.34
VPS3P23643 YJL152WYJL152W 360 nt12.9□□□□□ -0.34
VPS3P23643 YPR011CYPR011C 981 nt12.9□□□□□ -0.34
VPS3P23643 YLR236CYLR236C 324 nt12.89□□□□□ -0.35
VPS3P23643 SSA4YER103W 1929 nt12.89□□□□□ -0.35
VPS3P23643 RPP2AYOL039W 321 nt12.83□□□□□ -0.36
VPS3P23643 YCH1YGR203W 447 nt12.81□□□□□ -0.36
VPS3P23643 IDH1YNL037C 1083 nt12.78□□□□□ -0.36
VPS3P23643 MEP2YNL142W 1500 nt12.78□□□□□ -0.36
VPS3P23643 TIR4YOR009W 1464 nt12.75□□□□□ -0.37
VPS3P23643 PTP1YDL230W 1008 nt12.7□□□□□ -0.38
VPS3P23643 ERV46YAL042W 1248 nt12.69□□□□□ -0.38
VPS3P23643 PET9YBL030C 957 nt12.68□□□□□ -0.38
VPS3P23643 ART5YGR068C 1761 nt12.68□□□□□ -0.38
VPS3P23643 LPX1YOR084W 1164 nt12.66□□□□□ -0.38
VPS3P23643 YDR433WYDR433W 441 nt12.63□□□□□ -0.39
VPS3P23643 CAC2YML102W 1407 nt12.62□□□□□ -0.39
VPS3P23643 GBP2YCL011C 1284 nt12.62□□□□□ -0.39
VPS3P23643 YMR057CYMR057C 372 nt12.6□□□□□ -0.39
VPS3P23643 GFD2YCL036W 1701 nt12.59□□□□□ -0.39
VPS3P23643 MRPL8YJL063C 717 nt12.59□□□□□ -0.39
VPS3P23643 YKR040CYKR040C 504 nt12.58□□□□□ -0.4
VPS3P23643 YCL048W-AYCL048W-A 240 nt12.58□□□□□ -0.4
VPS3P23643 DCW1YKL046C 1350 nt12.55□□□□□ -0.4
VPS3P23643 SPP1YPL138C 1062 nt12.48□□□□□ -0.41
VPS3P23643 TCD2YKL027W 1344 nt12.46□□□□□ -0.41
VPS3P23643 MXR2YCL033C 507 nt12.46□□□□□ -0.41
VPS3P23643 EMI2YDR516C 1503 nt12.45□□□□□ -0.42
VPS3P23643 BDF1YLR399C 2061 nt12.44□□□□□ -0.42
VPS3P23643 ADO1YJR105W 1023 nt12.44□□□□□ -0.42
VPS3P23643 YEL076C-AYEL076C-A 651 nt12.4□□□□□ -0.42
VPS3P23643 YEL076CYEL076C 651 nt12.4□□□□□ -0.42
VPS3P23643 YLR464WYLR464W 651 nt12.4□□□□□ -0.42
VPS3P23643 YMR090WYMR090W 684 nt12.4□□□□□ -0.42
VPS3P23643 YDL221WYDL221W 552 nt12.39□□□□□ -0.43
VPS3P23643 RTS2YOR077W 699 nt12.39□□□□□ -0.43
VPS3P23643 FPS1YLL043W 2010 nt12.38□□□□□ -0.43
VPS3P23643 RTG1YOL067C 534 nt12.36□□□□□ -0.43
VPS3P23643 IRC15YPL017C 1500 nt12.35□□□□□ -0.43
VPS3P23643 CUE1YMR264W 612 nt12.33□□□□□ -0.44
VPS3P23643 RRD1YIL153W 1182 nt12.32□□□□□ -0.44
VPS3P23643 DED1YOR204W 1815 nt12.32□□□□□ -0.44
VPS3P23643 TAT1YBR069C 1860 nt12.28□□□□□ -0.44
VPS3P23643 GIS3YLR094C 1509 nt12.27□□□□□ -0.45
VPS3P23643 FRD1YEL047C 1413 nt12.26□□□□□ -0.45
VPS3P23643 YCL042WYCL042W 360 nt12.24□□□□□ -0.45
VPS3P23643 PAC11YDR488C 1602 nt12.22□□□□□ -0.45
VPS3P23643 HUA1YGR268C 597 nt12.2□□□□□ -0.46
VPS3P23643 YIL100WYIL100W 354 nt12.2□□□□□ -0.46
VPS3P23643 SDH1YKL148C 1923 nt12.18□□□□□ -0.46
VPS3P23643 SOR2YDL246C 1074 nt12.18□□□□□ -0.46
VPS3P23643 FMP52YER004W 696 nt12.18□□□□□ -0.46
VPS3P23643 SOR1YJR159W 1074 nt12.18□□□□□ -0.46
VPS3P23643 FMT1YBL013W 1206 nt12.17□□□□□ -0.46
VPS3P23643 SCC4YER147C 1875 nt12.16□□□□□ -0.46
VPS3P23643 YLR235CYLR235C 399 nt12.12□□□□□ -0.47
VPS3P23643 YBR220CYBR220C 1683 nt12.1□□□□□ -0.47
VPS3P23643 PTH1YHR189W 573 nt12.1□□□□□ -0.47
VPS3P23643 UBX6YJL048C 1191 nt12.08□□□□□ -0.48
VPS3P23643 YKL030WYKL030W 606 nt12.08□□□□□ -0.48
VPS3P23643 CWP1YKL096W 720 nt12.06□□□□□ -0.48
VPS3P23643 NVJ2YPR091C 2313 nt12.04□□□□□ -0.48
VPS3P23643 ADH2YMR303C 1047 nt12.01□□□□□ -0.49
VPS3P23643 YDR094WYDR094W 336 nt11.98□□□□□ -0.49
VPS3P23643 LCB1YMR296C 1677 nt11.97□□□□□ -0.49
VPS3P23643 YNL195CYNL195C 786 nt11.96□□□□□ -0.49
VPS3P23643 PCM1YEL058W 1674 nt11.95□□□□□ -0.5
VPS3P23643 SNF6YHL025W 999 nt11.94□□□□□ -0.5
VPS3P23643 DIC1YLR348C 897 nt11.9□□□□□ -0.5
VPS3P23643 TIM23YNR017W 669 nt11.89□□□□□ -0.51
VPS3P23643 RNQ1YCL028W 1218 nt11.85□□□□□ -0.51
VPS3P23643 YJL225CYJL225C 5277 nt11.84□□□□□ -0.51
VPS3P23643 YIH1YCR059C 777 nt11.83□□□□□ -0.52
VPS3P23643 YLR179CYLR179C 606 nt11.81□□□□□ -0.52
VPS3P23643 RRT12YCR045C 1476 nt11.81□□□□□ -0.52
VPS3P23643 tL(GAG)GtL(GAG)G 82 nt11.8□□□□□ -0.52
VPS3P23643 YSC84YHR016C 1407 nt11.78□□□□□ -0.52
VPS3P23643 YPR064WYPR064W 420 nt11.78□□□□□ -0.52
VPS3P23643 Q0182Q0182 405 nt11.75□□□□□ -0.53
VPS3P23643 YHL050CYHL050C 2094 nt11.74□□□□□ -0.53
VPS3P23643 PCH2YBR186W 1695 nt11.72□□□□□ -0.53
VPS3P23643 SEC11YIR022W 504 nt11.71□□□□□ -0.53
VPS3P23643 YFL015W-AYFL015W-A 318 nt11.7□□□□□ -0.54
VPS3P23643 TAD3YLR316C 969 nt11.7□□□□□ -0.54
VPS3P23643 SIM1YIL123W 1431 nt11.69□□□□□ -0.54
VPS3P23643 YFR018CYFR018C 1092 nt11.69□□□□□ -0.54
VPS3P23643 AHT1YHR093W 549 nt11.69□□□□□ -0.54
VPS3P23643 YLL053CYLL053C 459 nt11.69□□□□□ -0.54
VPS3P23643 BIO4YNR057C 714 nt11.68□□□□□ -0.54
VPS3P23643 AQY1YPR192W 918 nt11.68□□□□□ -0.54
VPS3P23643 GUT2YIL155C 1950 nt11.67□□□□□ -0.54
VPS3P23643 WSC2YNL283C 1512 nt11.67□□□□□ -0.54
VPS3P23643 FTR1YER145C 1215 nt11.64□□□□□ -0.55
VPS3P23643 RRT5YFR032C 870 nt11.63□□□□□ -0.55
VPS3P23643 GAL1YBR020W 1587 nt11.6□□□□□ -0.55
VPS3P23643 PAU16YKL224C 372 nt11.59□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms