Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC007614.4-201ENST00000564048 1827 ntBASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AC007322.4-201ENST00000509611 723 ntBASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AP002761.4-201ENST00000565433 3361 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 KRT8P24-201ENST00000560290 1559 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PC-208ENST00000529047 1607 ntTSL 3 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AL355472.2-201ENST00000422958 438 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AC024563.2-201ENST00000603282 481 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AC005181.1-201ENST00000604782 1256 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MIR7108-201ENST00000614319 87 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms