Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 AC026979.3-201ENST00000607315 403 ntBASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 AC105339.1-204ENST00000636249 355 ntBASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL27Q9Y4X3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AZGP1P1-201ENST00000411909 902 ntBASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AL645939.2-201ENST00000427340 991 ntBASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 AC022145.2-201ENST00000598203 171 ntBASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 MTDHP5-201ENST00000598980 586 ntBASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL27Q9Y4X3 ELL2P1-201ENST00000413990 1906 ntBASIC15.21■□□□□ 0.02
CCL27Q9Y4X3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCL27Q9Y4X3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL27Q9Y4X3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CCL27Q9Y4X3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL27Q9Y4X3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 AL607033.1-201ENST00000623900 1599 ntBASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL27Q9Y4X3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms