Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AC126335.2-201ENST00000623362 4637 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 KRT8P44-201ENST00000441609 1350 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AC132938.5-201ENST00000624980 1813 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 TCAF1P1-201ENST00000414990 2232 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 AC011498.5-201ENST00000592027 486 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH1Q9Y2L9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 AC126365.1-201ENST00000578585 1514 ntBASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
LRCH1Q9Y2L9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms