Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 MIR4321-201ENST00000592276 80 ntBASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 CHCHD2P3-201ENST00000603038 451 ntBASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AC008494.3-201ENST00000606615 944 ntBASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AC008894.3-201ENST00000624324 3103 ntBASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2IPQ9Y2D8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSX2IPQ9Y2D8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 PCDH8P1-201ENST00000428983 2773 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ARSEP1-201ENST00000420443 635 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 U91328.1-201ENST00000437528 223 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 INE1-201ENST00000456273 945 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TIMM17BP1-201ENST00000545713 516 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 RRP7BP-205ENST00000566851 833 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AC007431.3-201ENST00000623221 587 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 DOC2GP-204ENST00000639052 2548 ntBASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms