Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 AC004790.2-201ENST00000623588 572 ntBASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXJ3Q9UPW0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXJ3Q9UPW0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 HNRNPDP1-201ENST00000439535 754 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC108073.2-201ENST00000464002 357 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 FAM215A-202ENST00000632077 792 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 AC026748.1-201ENST00000624349 3251 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 FLJ16779-201ENST00000612722 7638 ntBASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXJ3Q9UPW0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 LINC01101-201ENST00000622953 1884 ntBASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXJ3Q9UPW0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms