Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.83■□□□□ 0.29
CDH9Q9ULB4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH9Q9ULB4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH9Q9ULB4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH9Q9ULB4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 AL603832.2-201ENST00000566195 2125 ntBASIC16.83■□□□□ 0.28
CDH9Q9ULB4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 AL607033.1-201ENST00000623900 1599 ntBASIC16.83■□□□□ 0.28
CDH9Q9ULB4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH9Q9ULB4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AC112504.1-201ENST00000623415 1841 ntBASIC16.82■□□□□ 0.28
CDH9Q9ULB4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 SLED1-202ENST00000512051 380 ntBASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 TP53TG3HP-202ENST00000569755 579 ntBASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AC099568.2-201ENST00000609194 695 ntBASIC16.82■□□□□ 0.28
CDH9Q9ULB4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AC105233.6-201ENST00000642093 218 ntBASIC16.82■□□□□ 0.28
CDH9Q9ULB4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH9Q9ULB4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 RRP7BP-205ENST00000566851 833 ntBASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AC140912.1-201ENST00000577171 1054 ntBASIC16.81■□□□□ 0.28
CDH9Q9ULB4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms